Cyclobacterium xiamenense: ABWH99_19790
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Entry
ABWH99_19790 CDS
T10772
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
cxi Cyclobacterium xiamenense
Pathway
cxi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cxi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ABWH99_19790 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cxi03019
]
ABWH99_19790 (groL)
03110 Chaperones and folding catalysts [BR:
cxi03110
]
ABWH99_19790 (groL)
03029 Mitochondrial biogenesis [BR:
cxi03029
]
ABWH99_19790 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cxi04147
]
ABWH99_19790 (groL)
Enzymes [BR:
cxi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
ABWH99_19790 (groL)
Messenger RNA biogenesis [BR:
cxi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
ABWH99_19790 (groL)
Chaperones and folding catalysts [BR:
cxi03110
]
Heat shock proteins
HSP60 / Chaperonin
ABWH99_19790 (groL)
Mitochondrial biogenesis [BR:
cxi03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
ABWH99_19790 (groL)
Exosome [BR:
cxi04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
ABWH99_19790 (groL)
Exosomal proteins of other body fluids (saliva and urine)
ABWH99_19790 (groL)
Exosomal proteins of breast cancer cells
ABWH99_19790 (groL)
Exosomal proteins of colorectal cancer cells
ABWH99_19790 (groL)
Exosomal proteins of bladder cancer cells
ABWH99_19790 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
divDNAB
VP4_helical
Pho88
KH_PARP14_2
Motif
Other DBs
NCBI-ProteinID:
XHC45146
LinkDB
All DBs
Position
4859525..4861153
Genome browser
AA seq
542 aa
AA seq
DB search
MAKELFFNTDARDRLKKGVDALADAVKVTLGPKGRNVILDKKFGAPTITKDGVTVAKEIE
LEDAIENMGAQLVKEVASKTADDAGDGTTTATVLTQSIFSVGIKNVAAGANPMDLKRGID
KAVSSVVEELRKASKQISTSKEIAQVGTISANNDDEIGKMIADAMEKVGKDGVITVEEAK
GTETEVKTVEGMQFDRGYLSPYFTTNTEKMEAELENPYILIYDKKISAMKELLPVLEPVA
QSGRPLLIIAEDVDGEALATLVVNKIRGALKVAAVKAPGFGDRRKAMLEDIATLTGGTVI
SEERGYKLENVTIDYLGTAEKINIDKDNTTIVNGAGEKAAIEGRINEIKSQIEKTTSDYD
REKLQERLAKLSGGVAILYIGAATEVEMKEKKDRVDDALHATRAAVQEGVVVGGGVALIR
ASAALDKLKGANEDEDTGINIIKQAVESPLRTIVSNSGGEGSVVINKIRDSKGDYGYNAR
TDKFEDLFKAGVIDPTKVTRLALENAASIAALLLTTECVVADIKEEAPAGPPMGGGGMGG
MM
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggctaaggaattatttttcaacacggatgcgagagatcgtctgaaaaaaggtgtagat
gcgcttgcagacgcagtaaaggtaacgttaggtcccaagggcagaaacgtgattttggac
aaaaaatttggtgccccaaccatcaccaaagatggggtaaccgttgccaaggaaattgaa
ctggaagacgctatcgaaaacatgggggcccagttggtgaaagaagtcgcctcaaaaacg
gcagatgatgccggagacggtaccactaccgctaccgttttgacacagtcgattttttca
gtaggtatcaaaaacgtagcggcaggcgccaatcccatggacctaaagcgaggtatcgac
aaagcggtaagctctgtagtagaagaattaagaaaagcatccaagcaaatttccacttcg
aaagaaattgctcaggttgggaccatttctgcaaacaacgatgacgaaatcggtaaaatg
attgcagatgcgatggaaaaggtaggcaaagacggggtgattaccgtcgaagaagccaaa
ggaaccgaaactgaagtgaagaccgttgaagggatgcagttcgaccgaggatacctctct
ccttatttcaccaccaatacggagaaaatggaagccgaattggagaacccttacatcttg
atctacgataagaaaatctccgccatgaaggagttacttcctgtattggaacccgtagct
cagtctggtcgaccacttttgatcattgccgaagacgtggatggagaagcgcttgctacc
ctggtagtgaataaaatccgaggcgcattgaaagttgctgcggtgaaagcaccaggtttt
ggcgatcgtagaaaagccatgttggaagacatcgcaacacttaccggaggtaccgtgatt
tctgaagaaagagggtacaaactggagaacgttacgatcgactacctgggtaccgccgaa
aaaatcaatattgacaaagacaacacaaccatcgtaaatggtgctggtgaaaaagcagcg
atcgaaggtagaatcaacgagatcaagagtcagatcgaaaaaaccacttcggactacgat
cgggaaaaacttcaggagaggcttgccaagctttccggaggcgtcgccatcctgtacatt
ggtgcagccactgaagtagaaatgaaagagaaaaaagaccgcgtcgacgatgccctgcac
gctacacgcgccgctgtacaggaaggtgtagtcgttgggggtggagttgctctgattcgc
gcttctgccgccttggataaactaaaaggagcaaacgaagacgaagacaccggtatcaac
atcatcaaacaagcagtggagtctccattgagaaccattgtttccaattccggtggagaa
ggttctgtggtcatcaacaagatcagagattccaagggcgattacggatacaacgcgaga
acagataagtttgaagatctgttcaaagcgggtgtaatcgatcctaccaaagttacccgt
ttggcgctggaaaatgctgcctcaatcgcggcacttctgctgactaccgaatgtgtggta
gcggacatcaaggaagaagctccagctggacctccaatgggaggcggaggaatgggcggt
atgatgtaa
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