Cellulomonas xiejunii: NP048_00295
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Entry
NP048_00295 CDS
T09093
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
cxie
Cellulomonas xiejunii
Pathway
cxie03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cxie00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NP048_00295
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cxie03000
]
NP048_00295
03400 DNA repair and recombination proteins [BR:
cxie03400
]
NP048_00295
Enzymes [BR:
cxie01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
NP048_00295
Transcription factors [BR:
cxie03000
]
Prokaryotic type
Helix-turn-helix
AraC family
NP048_00295
DNA repair and recombination proteins [BR:
cxie03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
NP048_00295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
HhH-GPD
DUF6233
Motif
Other DBs
NCBI-ProteinID:
UUI71953
UniProt:
A0ABY5KQ23
LinkDB
All DBs
Position
58358..59824
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AA seq
488 aa
AA seq
DB search
MHQDTERCIRAVQSRDSRFDGWFFTAVLSTGIYCRPSCPVPPPKVANMRFMPSSAAAQQA
GFRACKRCRPDASPGSPEWNQRADLTARAMRLIADGVVDRSGVSGLATRLGYSVRQVERH
LREELGTGPLALARAQRAQTARILLEGTRLPMADVAFAAGFSSVRSFNDTVREVFALAPT
ELRRRATGSELAAPGVLTVRLPFREPLCPDNLFGHLVETAVPGVEEWRDGAFRCSLRLGT
GHAIASLRPMPQHVVCELVLSDLRHLSTAIARCRRLLDLDADPVAVDDALRADPVLQPLV
DAAPGRRVPRTTDPEGFAVRAVLGQQVSTAAARTHAARLVVAHGTPIDDPHGGLTHLFPE
PSSLASLDPARLAFPTSRRHAVLRLVEALADGSVDLGAGGDWQEARARLTALPGIGPWTV
EMIAMRALGDPDAFVPSDLGVRAAAQRLGLPSTPGALTRRSAPWRPWRAYAVQYLWAVGD
HPVNQMPS
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
gtgcaccaggacaccgagcgctgcatccgcgctgtgcagtcgagggacagccggttcgac
ggctggttcttcaccgctgtcctgagcacgggcatctactgccggccgagctgcccggtg
ccccctcccaaggtcgcgaacatgcggttcatgccgagctcggccgcggcccagcaggcc
ggcttccgggcgtgcaaacggtgccgcccggacgccagccccggctcgccggagtggaac
cagcgggccgacctgacggcgcgggcgatgcggctcatcgccgacggcgtggtcgaccgg
tcgggggtctccgggctcgccacgcgactcgggtacagcgtgcggcaggtcgaacgccac
ctgcgcgaggagctggggacgggaccgctcgccctcgctcgcgcgcagcgggcacagacg
gcgcgcatcctgctggagggcacacggctgccgatggccgacgtggcgttcgccgccggc
ttctccagcgtccggtcgttcaacgacaccgtgcgtgaggtcttcgcgctggcccccacc
gagctgcgccgtcgtgccacgggcagcgagctcgctgcacccggggtgctgaccgtgcgg
ttgcccttccgtgagccgctgtgcccggacaacctcttcggccacctcgtcgagaccgcg
gtgcccggtgtggaggagtggcgtgacggcgcgttccgttgttccttgcggctcgggacc
gggcacgcgatcgcctccctgcgtccgatgccgcagcacgtcgtctgcgagctcgtcctc
agcgacctgcgccacctgtcgacggcgatcgcgcgctgccgccgcctgctcgacctcgac
gccgaccccgtggccgtcgacgacgccctgcgtgccgacccggtgctgcagcccctcgtc
gacgcggcacccggccgccgcgtgccgcgcacgaccgacccggagggcttcgccgtgcgg
gccgtgctgggccagcaggtctcgacggccgccgcgcgcacccacgcggcccggttggtc
gtcgcgcacggaaccccgatcgacgatccccacggcggcctgacccacctgttcccggaa
ccgtcgagccttgcttcgctcgacccggcccgtctggcgttcccgacgtcccgacgccac
gccgtcctgcggctcgtcgaggcgctcgccgacggcagcgtcgacctcggagcgggcggc
gactggcaggaggcgcgcgcccgcctgacggcgctgccggggatcgggccctggacggtg
gagatgatcgcgatgcgggcgctcggcgaccccgacgcgttcgtgccgtccgacctcggg
gtgcgcgcggcggcgcagcggctgggtcttccctcgacccctggcgccctcacccggcgc
agcgccccgtggcgaccgtggcgggcgtacgcggtccagtacctgtgggccgtcggtgac
caccccgtcaaccagatgccctcgtga
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