Cellulomonas xiejunii: NP048_07980
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Entry
NP048_07980 CDS
T09093
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
cxie
Cellulomonas xiejunii
Pathway
cxie03030
DNA replication
cxie03430
Mismatch repair
cxie03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cxie00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NP048_07980 (dnaE)
03430 Mismatch repair
NP048_07980 (dnaE)
03440 Homologous recombination
NP048_07980 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cxie03032
]
NP048_07980 (dnaE)
03400 DNA repair and recombination proteins [BR:
cxie03400
]
NP048_07980 (dnaE)
Enzymes [BR:
cxie01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NP048_07980 (dnaE)
DNA replication proteins [BR:
cxie03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NP048_07980 (dnaE)
DNA repair and recombination proteins [BR:
cxie03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NP048_07980 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HHH_3
MCM10_OB
DUF655
DUF2490
Motif
Other DBs
NCBI-ProteinID:
UUI73354
LinkDB
All DBs
Position
1741511..1745074
Genome browser
AA seq
1187 aa
AA seq
DB search
MAAGGSPDPSFVHLHVHSEYSMLDGAARIGEMLDEAARLGQTAMAITDHGYLFGAFEFWQ
KATDRGIKPIIGVEAYVTPGTSRFDQNRVRWGEAHQAADDVSARGAYTHLTLLSRTTEGM
HNLFRMGSLASIEGQMGKWPRMDRELLSRYSEGMIATSGCPSGEIQTRLRLGHYDEAVRA
AGELQDIFGKDYFYVEVMDHGLDIERRVIKDLLRVAESIGAPLVATNDLHYTRQEDAHAH
EVLLAVQSGSTLDEPTSDQGGSRFAFGGTGYYVQSAAEMRRTWAELPEACDNTVLIAEQC
EVKFNTGANYMPRFPVPAGENEDSWFIKEVENGLLRRYHGSIPDAVRKQADYETGVITQL
GFSGYFLVVADFINWAKKQGIRVGPGRGSAAGSMASYAVGITELDPLEHGLIFERFLNPE
RVSWPDVDVDFDERRRGEVIRYVSDKYGDDRVCQIVTYGTIKAKQALKDASRVLGFPFAM
GEKLTKAMPPPVMGKDIPLSGMYDPEHPRYAEADEFRQVVAADPEAQRVLETARGLENLK
RQWGVHAAGVIMSSEPLLDIIPIMKRPQDGAIITQFDQPASEALGLIKMDFLGLRNLTIL
DDALENIVMNGKPAILIEEVPLDDPATYELLGRGDTLGVFQLDGGPMRSLLRQMRPDNFE
DISAVIALYRPGPMGMNSHVNYALRKNGLQEIEPIHPELVEPLQDVVGVTHGLIVYQEQV
QKAAQVLAGYSLGQADLLRRAMGKKKQEVLDKEFVPFQAGMRERGYSDAAIQAVWDVLVP
FAGYAFNKAHSAAYGVVSYWTAYLKANYPTEYMAALLTSVRDDKDKSALYLGECRHMGIT
VLPPDVNSSSANFTAVGTDIRFGLTAVRNVGANVVDAIVAAREEKGAFTSFTDFLDKVPA
VVCNKRTIESLIKAGAFDSLGHPRRALLLVHEQAVDAVIDVKRKEATGQFDLFADLAGED
ETGSGIAVTIPDLPDWDKKQRLAFEREMLGLYVSDHPLSGLEHVLSAQADVSIATLNADT
ERPDGSTVVVAGLVTSLQRKMSKQGNPWAAVTLEDMEGSVEIMFFGETYLAYSTVLAEDA
VLVVRGRVRRRDDTMQLQAMEVSIPDTSQAADSPVVVSLTEGRCTPPVVDRLREVLSTHP
GVTEVHLRLTSPGRAVVMRLEDGLRVERSPSLFGDLKALLGPSCLAS
NT seq
3564 nt
NT seq
+upstream
nt +downstream
nt
atggctgctggaggatccccggacccgtccttcgtccacctccacgtgcacagcgagtac
tcgatgctcgacggcgcggcgcgcatcggcgagatgctcgacgaagccgcacgcctgggg
cagacggcgatggcgatcaccgaccacgggtacctgttcggtgcgttcgagttctggcag
aaggcgaccgaccgcggcatcaagccgatcatcggcgtcgaggcgtacgtcacaccgggg
accagccggttcgaccagaaccgcgtgcgctggggtgaggcgcaccaggctgccgacgac
gtctcggcgcgcggtgcctacacgcacctgacgctgctgagccggaccaccgagggcatg
cacaacctcttccggatggggtcgctggcctcgatcgaggggcagatgggcaagtggccc
cggatggaccgcgagctgctgtcccggtactccgagggcatgatcgcgacgagcgggtgc
ccctcgggcgagatccagacgcggctgcgtctggggcactacgacgaggccgtgcgcgcc
gcaggcgagctgcaggacatcttcggcaaggactacttctacgtcgaggtcatggaccac
gggctcgacatcgagcggcgtgtgatcaaggatctgctgcgcgtcgccgagagcatcggg
gctccgctcgtcgcgacgaacgacctgcactacacgcgtcaggaggacgcgcacgcgcac
gaggtcctgctcgcggtgcagtccggctcgacgctcgacgagcccacgagcgaccagggc
ggctcgcggttcgcgttcggggggaccgggtactacgtgcagtcggcggccgagatgcgt
cgcacgtgggccgagctgcccgaggcgtgcgacaacacggtgctgatcgccgagcagtgc
gaggtcaagttcaacaccggcgccaactacatgccccgcttccccgtcccggctggggag
aacgaggactcgtggttcatcaaggaggtcgagaacggcctcctgcggcgctaccacggc
tcgatccccgacgcggtgcgcaagcaggcggactacgagacgggcgtcatcacccagctc
ggtttctcgggctacttcctcgtggtcgccgacttcatcaactgggccaagaagcagggc
atccgggtgggtcccggtcgtggctcggccgccggctcgatggcgtcctacgcggtcggc
atcaccgagctcgacccgctcgagcacggtctgatcttcgaacggttcctcaacccggag
cgcgtgtcctggcccgacgtcgacgtcgacttcgacgagcgccggcgcggcgaggtcatc
cgctacgtgagcgacaagtacggcgacgaccgcgtctgccagatcgtcacctacggcacc
atcaaggccaagcaggcgctcaaggacgcgtcccgcgtgctgggcttcccgttcgccatg
ggggagaagctcaccaaggcgatgccgccgcccgtcatgggcaaggacatcccgctgtcc
ggcatgtacgacccggagcacccgcggtacgcggaggccgacgagttccggcaggtcgtc
gcagcggaccccgaggcgcagcgcgtgctcgagaccgcgcgcggcctggagaacctcaag
cgccagtggggcgtccacgcagccggcgtcatcatgtcgagcgagccgctgctcgacatc
atcccgatcatgaagcgcccgcaggacggcgcgatcatcacgcagttcgaccagcccgcg
tccgaggcgctcgggctgatcaagatggacttcctgggactgcgcaacctcacgatcctc
gacgacgccctcgagaacatcgtgatgaacggcaagccggcgatcctcatcgaggaggtc
ccgctcgacgacccggcgacgtacgagctgctgggccggggcgacacgctcggtgtgttc
cagctcgacggcgggccgatgcgctcgctcctgcgccagatgcgccccgacaacttcgag
gacatctccgccgtcatcgcgctgtaccgcccggggccgatgggcatgaactcgcacgtc
aactacgcgttgcggaagaacggcctgcaggagatcgagccgatccaccccgagctggtc
gagccgctccaggacgtcgtgggcgtcacgcacgggttgatcgtctaccaggagcaggtg
cagaaggcggcgcaggtgctcgccgggtactcgctcggacaggccgacctgctgcgtcgc
gcgatgggcaagaagaagcaggaggtgctcgacaaggagttcgtgcccttccaggcgggc
atgcgcgagcgcgggtattcggatgccgcgatccaggcggtgtgggacgtcctcgtgccg
ttcgcggggtacgcgttcaacaaggcgcactccgcggcgtacggcgtcgtgtcctactgg
acggcgtacctcaaggcgaactacccgaccgagtacatggccgcgctgctcacgagcgtg
cgcgacgacaaggacaagtcggcgttgtacctcggcgagtgccggcacatgggcatcacg
gtgctgccgccggacgtgaactcgtcgtccgcgaacttcacagcggtcggtaccgacatc
cgcttcgggctcacggccgtgcgcaacgtcggtgcgaacgtggtggacgcgatcgtggcg
gcccgcgaggagaagggcgcgttcacgtcgttcacggacttcctcgacaaggtgccggcc
gtcgtctgcaacaagcgcaccatcgagtcgctcatcaaggccggcgcgttcgactcgttg
ggccacccgcgccgcgcgctgctgctggtgcacgagcaggcggtcgacgcggtcatcgac
gtcaagcgcaaggaggcgaccggccagttcgacctgttcgccgacctggcgggggaggac
gagaccggctcaggcatcgcggtgacgatccccgacctgccggactgggacaagaagcag
cgtctggcgttcgagcgcgagatgctcggtctgtacgtctcggaccacccgctgtcgggg
ctcgagcacgtgctgtccgcgcaggccgacgtctcgatcgcgacgctcaacgcggacacc
gagcggccggacgggtcgacggtcgtggtcgcaggcctcgtcacgagcctgcagcgcaag
atgtccaagcagggcaacccctgggccgcggtgacgctggaggacatggagggctccgtc
gagatcatgttcttcggcgagacctacctggcgtactcgacggtgctggccgaggacgcc
gtgctcgtcgtgcgcggcagggtgcgtcgtcgcgacgacaccatgcagctgcaggccatg
gaggtgtccatccccgacacctcgcaggccgcggactcgccggtcgtcgtgtcgctcacc
gagggacgctgcacgccgcccgtggtggaccggttgcgcgaggtgctctcgacccacccc
ggggtcacggaggtccacctgcgcctgacgagccccggccgcgcggtggtcatgcggctc
gaggacggtctgcgcgtcgagcggtcaccctcgctgttcggtgacctcaaggcgctgctc
ggcccgagctgcctggcgtcctga
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integrated database retrieval system
