Cellulomonas xiejunii: NP048_07995
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Entry
NP048_07995 CDS
T09093
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
cxie
Cellulomonas xiejunii
Pathway
cxie03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cxie00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NP048_07995
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cxie03019
]
NP048_07995
03400 DNA repair and recombination proteins [BR:
cxie03400
]
NP048_07995
Enzymes [BR:
cxie01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NP048_07995
Messenger RNA biogenesis [BR:
cxie03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
NP048_07995
DNA repair and recombination proteins [BR:
cxie03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
NP048_07995
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Pribosyltran
AAA_30
RecQ_Zn_bind
Motif
Other DBs
NCBI-ProteinID:
UUI73357
LinkDB
All DBs
Position
complement(1746738..1748924)
Genome browser
AA seq
728 aa
AA seq
DB search
MPPHTAPAPVVDRVALRAQAEEVLRALVGRDGARLHEDQWQAVEALVADRRRVLVVQRTG
WGKSAVYFVATALLRRGAAGPPRGATIIVSPLLALMRNQVDAARRAGIAAETLNSANQQD
WDDVHARIAAGEVDVLLVSPERLNNPGFRDEVLPRLASDAGLVVVDEAHCVSDWGHDFRP
DYRRIGTLLADLPAGVPVLATTATANERVTADVAEQLAVTDVGRTGVGGTDVGGTTPDGT
LVLRGTLDRPSLRLQVTTLPDVATRLAWLAATLPTLEGSGIVYCLTIAAVEQVTEHLRAA
GLDVRAYTGQTDPTEREAIEADLLANRVKALVATSALGMGYDKPDLGFVVHMGAPSSPIA
YYQQVGRAGRATARADVVLLPGHDDQAIWEWFASTAFPPEDQVRATLAALDAHGTLSTAA
LETYVSLRRSRLEGMLKVLDVDGAVRRVRGGWQSTGRPWAYDGERYARVTAARRAEQRTM
LDYQATDGCRMAFLRAALDDPELPEGWRCGRCDRCTGTAVGAVPDASAVDHARELLAVPG
EPVTARRQWPSGLGALGLDLKGRIAADEQVGEGRAVGRLDALGWGGPLREALREQVPAEL
PANLRPAVRTVLEAWAPQVDAVVAIASDSRGSLVEHLAAGTARLLGVPLLGAFASTGSPS
RHDVNSAQRLADVLRHLDLPSDVAQEVAGRRVLLVDDRTDTGWTLTVAGRLLRRSGATQV
LPFVLGVG
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgcccccgcacaccgcccccgcgcccgtcgtcgaccgcgtcgcgctgcgtgcccaggcg
gaggaggtgctgcgggcgctcgtcggccgcgacggcgcccgcctgcacgaggaccagtgg
caggccgtcgaggcgctcgtcgcggaccgccgccgcgtgctcgtcgtgcagcgcaccggc
tggggcaagtcggccgtgtacttcgtcgcgaccgcgctcctgcgccgcggcgccgccggg
ccgccgcgcggggcgacgatcatcgtctcgccgctgctcgcactcatgcgcaaccaggtc
gacgccgcccgccgagccggcatcgcggccgagacgctgaactcggccaaccagcaggac
tgggacgacgtgcacgcgcgcatcgccgcgggcgaggtggacgtgctgctcgtctccccg
gagcggctcaacaacccggggttccgcgacgaggtgctgccgcggctcgcgtcggacgcc
gggctcgtcgtcgtggacgaggcgcactgcgtctccgactggggccacgacttccggccc
gactaccggcgcatcgggacgctgctggcggacctgccggccggcgtgccggtcctcgcg
acgaccgcgacggccaacgagcgcgtcacggcggacgtcgccgagcagctcgcagtgacg
gacgtcggacggacgggcgtcggcgggacggacgtcggcgggacaacaccggacggcacg
ctcgtcctgcgcggcacgctcgaccgcccgagcctgcgcctgcaggtcacgacgctgccg
gacgtcgcgacccgcctggcatggctggccgcgacgctgcccacgctcgagggctccggc
atcgtctactgcctgacgatcgccgctgtcgagcaggtcaccgagcacctgcgcgccgcc
gggctcgacgtgcgggcgtacacgggacagaccgacccgaccgagcgcgaggcgatcgag
gcggacctgctcgcgaaccgggtcaaggcgctggtcgcgacctcggcgctgggcatgggc
tacgacaagcccgacctgggcttcgtcgtccacatgggggcgccgtcctcgccgatcgcg
tactaccagcaggtcggtcgtgccggacgcgcgaccgcacgcgccgacgtggtcctgctg
cccggccacgacgaccaggcgatctgggagtggttcgcctcgaccgcgttcccgcccgag
gaccaggtccgcgcgaccctcgcggcgctcgacgcccacggcacgctgtcgacggctgcc
ctggagacgtacgtcagcctgcggcgcagccgcctcgaggggatgctcaaggtgctcgac
gtggacggcgcggtgcggcgcgtccggggcgggtggcagtcgacggggcgcccgtgggcc
tacgacggtgagcggtacgcgcgcgtcacggcggcgcgacgggcggagcagcgcacgatg
ctggactaccaggcgaccgacggctgccggatggcgttcctgcgggccgccctggacgac
cccgagctgcccgagggctggcggtgcggccgctgcgaccggtgcacgggcacggccgtc
ggcgcggtccccgacgcgtcggccgtcgatcacgcgcgtgagctgctcgcggtgccgggc
gagccggtgacggcgcgacggcagtggccgtcgggactcggcgcgctggggctcgacctc
aagggccgcatcgcggccgacgagcaggtcggcgagggccgggcggtggggcgcctcgac
gcgctcggctggggcggcccgctgcgcgaggccctgcgcgagcaggtgccggccgagctg
ccggcgaacctgcgaccggcggtccgcaccgtcctggaggcgtgggcgccgcaggtcgac
gccgtggtcgcgatcgcctccgacagccgcgggtcgctcgtcgagcacctcgcggcgggc
accgcacgcctgctgggcgtcccgctgctcggggcgttcgcgtccacggggtccccctca
cggcacgacgtgaactccgcgcagcggctcgccgacgtcctgcgtcacctagacctgccg
tccgacgtggcgcaggaggtcgccggcaggcgcgtgctgctcgtcgacgaccgcacggac
accggctggaccctgaccgtcgccgggcggctcctgcgccgctccggtgcgacgcaggtg
ctgcccttcgtcctgggcgtgggctga
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