Cellulomonas xiejunii: NP048_11505
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Entry
NP048_11505 CDS
T09093
Name
(GenBank) Rne/Rng family ribonuclease
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
cxie
Cellulomonas xiejunii
Pathway
cxie03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cxie00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NP048_11505
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cxie03019
]
NP048_11505
03009 Ribosome biogenesis [BR:
cxie03009
]
NP048_11505
Enzymes [BR:
cxie01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
NP048_11505
Messenger RNA biogenesis [BR:
cxie03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
NP048_11505
Ribosome biogenesis [BR:
cxie03009
]
Prokaryotic type
rRNA processing factors
NP048_11505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
DnaJ_CXXCXGXG
Motif
Other DBs
NCBI-ProteinID:
UUI70432
LinkDB
All DBs
Position
complement(2522510..2525851)
Genome browser
AA seq
1113 aa
AA seq
DB search
MSPVNSPENADAADAAEAAPRKRRRRVVRDVVTPGADAPVAPPEVGTAAPEPSAGAAPVA
AEVAAPEVAAPEVETPEEPVQAPAPTRARRSRRVTRTVVLDDVAAPATQDAPVQPAPSGV
AEDPVEDEEAAQAASETPATDDDLAADDATADDAPTDEVPADEPEASGVADALAEDAAER
APRRRRSGRRGGRTARSAQDADAEQAPAGDEPVDEPAGTSGDERRDGPLDVLAELGPVRT
EEPAPRARMATTALLFQAADPEPRTRRRRAQASAGSPQEISDAARTDVDEQAPTGVEGSG
ADATGEAAADSVPAEGSGRARRRRGGRGRKAQAEVEDEATELEDQDDSQDDSQDEVQPEV
VDVDGTDADGDDDGTDDDAGDDDGTSPRRRRRRGGRGRRGRPDAPGSDDAADEPAAQDEP
DAEAEASASEDAGEDDSTGSSRRRRRRRRGARGEVADEPRRRSSGDEVTALRGSTRLEAK
RQRRREGRDAGRRRQVITEAEFLARREAVERAMVVREVDSRTQIAVLEDGVLVEHYVSNQ
AQASMVGNVYLGRVQNVLPSMEAAFVDVGKGRNAVLYAGEVNWDAAGLDGGQPRRIEQAL
KSGDAVLVQVTKDPIGHKGARLTSQITLAGRYLVYVPGGGMTGISRKLPDIERSRLKKIL
RDLVPDSAGVIVRTAAEGATEEELRADVARLQGQWEAIEKKRKTANAPALLQGEPDMAIR
VVRDIFNDDFSSLVVQGDDAWSTISTYVGELAPDLAARTEKWTGTQDVFTVHRVDEQLAK
GMDRKVWLPSGGSLVIDRTEAMTVVDVNTGKFTGAGGTLEETVTRNNLEAAEEIVRQLRL
RDIGGIIVIDFIDMVLESNRDLVLRRLVECLGRDRTKHQVAEVTSLGLVQMTRKRVGQGL
VEAFSETCEHCHGRGFIVHTDPVGKGGRPETHTQPAAEPSESKRARRKRGSAESAGVQHA
TVPVLPEAREAVKATLATIAAAAAHAHEHGVAPEELDAPAEADDAPAGGTPTDGAQAPDA
TRGAGTRRLGTLDVMAELGSTGVPPAATAAPVAATADARAVETDAPLALHAVAPEVFEDA
DGEPEADGAPDADGTPPAATDPTTDGAPAPTDG
NT seq
3342 nt
NT seq
+upstream
nt +downstream
nt
ttgtctcccgtgaacagccccgagaacgccgatgcagccgacgccgccgaggcggccccc
cgcaagcgtcgtcgccgagtcgtccgtgacgtcgtgacccccggcgccgacgcgcccgtc
gcgccccccgaggtcgggacggcggcccccgagccgtccgccggcgcggcaccggtcgct
gccgaggtcgcggcgcccgaggtcgcggcgcccgaggtggagacgcccgaggagccggtg
caggcgcccgcgccgacccgcgcacggcgctcgcgccgcgtgacccgcaccgtggtgctc
gacgacgtcgccgcacccgccacccaggacgcgccggtgcagcccgcgccgtcgggcgtc
gccgaggacccggtcgaggacgaggaagcggcgcaggccgcgagcgagaccccggcgacg
gacgacgatctcgccgccgacgacgccaccgccgacgacgctccgaccgacgaggtgccc
gcggacgagccggaggcgagcggcgtcgcggacgcgctggccgaggacgccgccgagcgc
gcgccgcgccgccggcgctccggtcgacgtggtggccgcaccgcccgttccgcgcaggac
gcggacgcggagcaggcccccgccggcgacgagccggtcgacgagcccgccggtacgtcg
ggcgacgagcgccgggacgggccgctcgacgtgctcgccgagctgggccccgtgcggacc
gaggagccggcgccgcgtgcccgcatggcgacgaccgccctgctcttccaggcggccgac
ccggagccgcgcacgcgcaggcgccgggcgcaggcctcggcggggtccccgcaggagatc
tcggacgcggcacgcaccgacgtggacgagcaggcccccaccggcgtcgagggctccggc
gcggacgcgaccggcgaggctgctgcggacagcgttcccgccgagggttccggccgtgcg
cgtcggcgccgcggcggtcgcggccgcaaggcccaggccgaggtcgaggacgaggccacg
gagctcgaggaccaggacgactcccaggacgactcccaggacgaggtgcagccggaggtc
gtggacgtcgacggcaccgacgcggacggtgacgacgacggcaccgacgacgacgcgggt
gacgacgacggcacgtcgccgcgccgccgccggcgccgtggcggtcggggacgtcggggc
cggcccgacgcgccgggcagcgacgacgcggctgacgagcctgccgcgcaggacgagccg
gacgccgaggccgaggcgtcggcgagcgaggacgcgggcgaggacgactcgaccgggtcc
agccggcgtcggcggcggcgtcggcgtggtgcccgcggcgaggtcgccgacgagccgcgc
cggcgctcgagcggtgacgaggtcacggcgctgcgggggtcgacgcgcctggaggccaag
cgtcagcgccgccgcgagggacgcgacgcgggccgacgacgccaggtcatcaccgaggcg
gagttcctcgcacgacgcgaggcggtcgagcgcgcgatggtcgtgcgcgaggtcgactcg
cgcacccagatcgcggtcctcgaggacggtgtgctcgtcgagcactacgtgtcgaaccag
gcgcaggcgtcgatggtcggcaacgtgtacctcgggcgcgtgcagaacgtgctgccgagc
atggaggccgcgttcgtcgacgtcggaaagggccgcaacgcggtcctgtacgcgggcgag
gtcaactgggacgccgccgggctcgacggcgggcagccgcgccgcatcgagcaggcgctg
aagtcgggcgacgcggtcctggtccaggtgaccaaggacccgatcggccacaagggcgcc
cggctcaccagccagatcacgctcgcgggccggtacctcgtgtacgtgcccggtggcggt
atgacaggcatcagccgcaagctgccggacatcgagcgctcgcgtctcaagaagatcctg
cgcgacctcgtgcccgactccgccggcgtcatcgtgcgcacggccgccgagggcgcgacc
gaggaggagctgcgcgccgacgtcgcccgtctgcagggccagtgggaggcgatcgagaag
aagcggaagacggcgaacgcccccgcactcctgcagggcgagcccgacatggcgatccgc
gtcgtccgcgacatcttcaacgatgacttctcgtcgctcgtcgtgcagggtgacgacgcg
tggtcgacgatctcgacctacgtgggcgagctcgcacccgacctcgccgcgcgcaccgag
aagtggacgggcacgcaggacgtcttcacggtgcaccgcgtggacgagcagctcgccaag
ggcatggaccgcaaggtctggctgccctcgggtggttcgctcgtcatcgaccgcaccgag
gcgatgaccgtcgtggacgtcaacaccggcaagttcaccggggcgggcgggaccctcgag
gagaccgtcacgcgcaacaacctcgaggcggccgaggagatcgtgcgccagctgaggctg
cgcgacatcggcggcatcatcgtcatcgacttcatcgacatggtgctcgagtcgaaccgc
gacctcgtgctgcgcaggctcgtcgagtgcctggggcgtgaccggaccaagcaccaggtg
gccgaggtgacgtcgctcgggctcgtgcagatgactcgcaagcgtgtcggccagggtctc
gtcgaggcgttcagcgagacctgcgagcactgccacggccgcgggttcatcgtccacacg
gaccccgtcggcaagggcgggcgtcccgagacgcacacgcagccggccgcggagccgagc
gagtcgaagcgtgcgcgacgcaagcgcggctccgccgagtccgccggtgtgcagcacgcg
accgtcccggtgctgcccgaggcgcgcgaggcggtcaaggcgacgctcgcgacgatcgcc
gcagccgctgcgcacgcgcacgagcacggggtcgcgccggaggagctcgacgcgcccgct
gaggccgacgacgccccggcgggcggcacgcccacggacggcgcgcaggctcctgacgcc
acgcgaggcgccggcacgcggcggctggggacgctcgacgtcatggcggagctgggctct
acgggcgtcccgcctgccgcgacggcagccccggtggccgccacggccgacgccagggcc
gtcgagacggacgcgccgctcgcgctgcacgcggtcgcccccgaggtgttcgaggacgcc
gacggggagccggaggccgacggtgcgcccgacgccgacggcacgcctccggcggcgacc
gatccgacgacggacggcgcacccgcgccgaccgacggctga
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