Cellulomonas xiejunii: NP048_12305
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Entry
NP048_12305 CDS
T09093
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
cxie
Cellulomonas xiejunii
Pathway
cxie03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cxie00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
NP048_12305 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cxie03400
]
NP048_12305 (recD)
Enzymes [BR:
cxie01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
NP048_12305 (recD)
DNA repair and recombination proteins [BR:
cxie03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NP048_12305 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
RecD_N
AAA_11
Helicase_RecD
Viral_helicase1
AAA_22
UvrD-helicase
AAA_16
SH3_13
AAA_28
SLFN-g3_helicase
PhoH
MeaB
SRP54
NTPase_1
Flavi_DEAD
TraI_hel_assoc_N
AAA_5
nSTAND3
Mg_chelatase
TrwB_AAD_bind
DO-GTPase1
AAA
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
UUI70584
LinkDB
All DBs
Position
2707668..2709590
Genome browser
AA seq
640 aa
AA seq
DB search
MSTDTGTHVRSALPGADADPGDPRRPWCAGALLAGFAAAGVLTSADVRVAERLGELTGED
DPTVHLAAALAVRAVRAGSVCVDLADAPTLAAEGSGDEPDAPPPDVALPWPDLVEWTAAV
RRSPMLADGVDGPADRPVRWVDGRVYLDRYWRDEQVVRRDVDARLVGLLDVDDAALRAAV
HARFGGPQDSRQRLAAATAALSRLTVLTGGPGTGKTTTVARLVAVLRDVAGPGLRVALAA
PTGKAAARLQEAVNAELARLAGETADAAAPLTASTVHRLLGWRPSSTRFAHDRTHRLPHD
VVVLDEASMVSLPLLARVLDALRPDARLVLVGDPDQLASVEVGAVLGDLVARPPARRMLP
ARLAAVLPGDVPGGSPADVRDAAALHGGVVRLVVPHRFGHDLGALADAVRRGDGDSTLAL
LRAGGPHASLVEPAGVTPADDEVPGLRLDVGSTGALVTAAARAGDAAGALEALNAHRLLL
AHRRGPAGVRRWAALAERWVAEATGDHEHGPWPVGRPLLVTANDRTTGLSNGDTGVIVSD
GAGGVVAAFGEPRAVRLVRPHRLPAVEPVHAMTVHRAQGSQFTGVTVLLPPASSPLLTRE
LLYTAVTRAREHVRVVGSADAVRAAVERPVRRASGLRFAR
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atgagcacggacaccgggacgcacgtgcggtccgcgctgccgggcgcggacgccgacccg
ggcgacccgcgtcggccctggtgcgcgggcgcgctgctcgccgggttcgccgccgcgggc
gtcctgacgtccgccgacgtgcgcgtcgccgaacggctgggagagctcacgggtgaggat
gacccgaccgtgcacctggcggccgcgctcgcggtgcgcgccgtgcgggccgggtcggtc
tgcgtcgatctggccgacgcgccgacgctcgcggccgagggctccggcgacgagcccgac
gctcccccgccggacgtcgccctgccgtggccggacctcgtggagtggaccgcagccgtg
cggcgcagcccgatgctcgccgacggcgtcgacggcccggccgaccggccggtgcgctgg
gtggacggacgcgtctacctcgacaggtactggcgcgacgagcaggtggtccgccgcgac
gtcgacgcgcgcctcgtcgggctgctcgacgtcgacgacgccgctctgcgcgcggcggtg
cacgcgcggttcggcggaccgcaggactcccgccagcgcctggccgccgcgaccgcggca
ctgtcccggctcaccgtcctcacgggcggccccggcacgggcaagaccacgaccgtcgct
cgcctggtcgccgtcctgcgcgacgtcgcgggcccgggcctgcgggtcgcgctcgcggca
ccgacgggcaaggcggctgcacgcctgcaggaggccgtgaacgccgagctcgcgcgattg
gcgggcgagaccgccgacgccgccgcaccgctcacggcgtcgacggtgcaccgcctgctg
gggtggcgcccgtcgagcacgcgcttcgcgcacgaccgcacgcaccgactcccgcacgac
gtggtcgtcctcgacgaggcgtcgatggtgtccctgccgctgctcgcccgcgtgctcgac
gcgctgcgtccggacgcccggctcgtcctcgtcggcgaccccgaccagctcgcgtccgtc
gaggtgggcgcggtgctgggcgacctcgtcgcgcgtccgccggcccgccggatgctgccg
gctcggctggccgccgtgctgcccggcgacgtcccgggcggctcccccgccgacgtccgc
gacgccgccgccctgcacggcggtgtggtccgactcgtcgtaccccaccgcttcggtcac
gacctcggcgcgctcgccgacgcggtccgccgcggcgacggcgactcgacgctcgccctg
ctgcgcgcgggcggtccgcacgcctccctcgtcgagccggcaggggtcacacccgccgac
gacgaggtccccggcctgcggctcgacgtcgggtcgacgggcgctctggtcacggctgcc
gcgcgcgcgggtgacgccgccggtgcgctcgaggcgctgaacgcgcaccggctgctgctg
gcgcaccgccgcggacctgccggtgtgaggcgctgggccgcgctcgccgagcgctgggtc
gccgaggcgaccggtgaccacgagcacggcccgtggccggtgggccgccccctgctcgtc
accgccaacgaccgcacgacgggcctgtcgaacggtgacaccggcgtgatcgtgtccgac
ggcgccggcggtgtggtcgcggcattcggcgaaccgcgcgcggtgcgtctggtgcgcccg
caccgcctgcccgccgtcgagcccgtgcacgccatgacggtgcaccgcgcccagggcagc
cagttcacgggtgtcaccgtcctgctgccacccgcgtcgtcgcccctgctcacgcgcgag
ctgctctacacggctgtcacgcgtgcgcgcgagcacgtgcgcgtcgtcggatcggccgac
gccgtgcgggcggccgtggaacggccggtgcgtcgcgcgagcggtctgcggttcgcgcgg
tag
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