KEGG   Synechococcus sp. JA-3-3Ab: CYA_0004
Entry
CYA_0004          CDS       T00318                                 
Name
(GenBank) metalloprotease, ATP-dependent, FtsH family
  KO
K03798  cell division protease FtsH [EC:3.4.24.-]
Organism
cya  Synechococcus sp. JA-3-3Ab
Brite
KEGG Orthology (KO) [BR:cya00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:cya01002]
    CYA_0004
  09182 Protein families: genetic information processing
   03110 Chaperones and folding catalysts [BR:cya03110]
    CYA_0004
Peptidases and inhibitors [BR:cya01002]
 Metallo peptidases
  Family M41: FtsH endopeptidase family
   CYA_0004
Chaperones and folding catalysts [BR:cya03110]
 Other chaperones and cochaperones
  AAA proteases
   CYA_0004
SSDB
Motif
Pfam: Peptidase_M41 AAA AAA_lid_3 FtsH_ext AAA_5 TIP49 RuvB_N LonB_AAA-LID AAA_17 AAA_16 nSTAND3 AAA_22 AAA_33 AAA_28 Mg_chelatase AAA_14 AAA_2 IstB_IS21 AAA_18 AAA_7 ABC_tran DUF815 Parvo_NS1 Zeta_toxin AAA_24 Sigma54_activat RsmF-B_ferredox TsaE
Other DBs
NCBI-ProteinID: ABC98237
UniProt: Q2JQW6
LinkDB
Position
complement(3256..5142)
AA seq 628 aa
MNKPLSPQRWLIALMLGFCLWQGSGLAPAHAALASALTYDRFLRYVEEGRVTDVRLLDNN
LVAEVTAVDPQTQHSTRYRVNLLPNTVPQLVDRLTEQGIEVAVVPTRDGSAFWAILGNLV
IPVLLLGGLFLFLRRAGGGAGGPGQAMNFGKSRARFQMEAKTGVKFDDVAGIEEAKEELQ
EVVTFLKKPERFTAVGAKIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSLSGSEFVEMF
VGVGASRVRDLFKKAKENAPCIVFIDEIDAVGRQRGAGIGGGNDEREQTLNQLLTEMDGF
EGNSGVIVIAATNRPDVLDAALLRPGRFDRQITVDRPSFKGRYEILRVHARNKKLAEEVS
LEAIARRTPGFAGADLANLLNEAAILAARRQHKAITNQDIDDAIDRITIGLTKPPLLDGK
SKRLIAYHECGHALLMTLLPHADPLNKVTIIPRSGGAGGFAQQLPNEEQIDSGMYSRAWL
LDRVVVGFGGRAAEEIVFGYSEVTTGASNDLQQNTNLVRQMVTRFGMSELGPLMWDPPNN
EIFLGGGWMNRVEYSEDVAAKIDRQVRQILESCYQRAKQILLEHRALLDRLADTLVERET
LDGDEFRAIVAEYVPIPEKIGLPSPKTA
NT seq 1887 nt   +upstreamnt  +downstreamnt
atgaacaaacctctatctccccagcgctggctaattgccctcatgctgggcttttgtctc
tggcagggatccggcctagctcctgcccacgccgctctggcctctgccctcacctatgac
cgcttcttgcgctatgtcgaggagggtcgcgttaccgatgtgcgcctcctcgataacaac
ctggtagccgaagtgacggctgttgacccacaaacgcagcattccacccgctaccgggtc
aacctgctgcccaacaccgtgccgcaactggtggatcgcctcaccgagcaggggatcgag
gtggctgtagtgcccacccgcgatggcagcgccttctgggcgatcttgggcaacctggtc
atcccggtgctgctgctgggggggttgttcttgttcctgcgccgcgctggcggaggagca
ggcggtcctggacaggcgatgaacttcggcaagtcgcgggcccgcttccagatggaagcc
aaaaccggcgtcaagtttgacgatgtagccgggatcgaggaggccaaagaagagctgcaa
gaggtggttaccttcctgaagaagccggagcgcttcactgccgtaggggccaagatcccc
aaaggcgtgctgttggtggggccgccggggacgggtaagaccctcttggccaaagccatt
gctggcgaggcgggagtgccttttttcagcctctctggctccgagttcgtggagatgttc
gtcggcgtgggggcctcgcgggtgcgggatctctttaagaaggccaaggagaatgctccc
tgcatcgtcttcatcgacgagatcgacgcggtgggccggcagcggggagcgggcattggc
ggcggcaacgacgagcgcgagcaaaccctgaaccagttgcttacggaaatggatgggttt
gagggcaactcaggggtaattgttattgccgcaaccaaccgcccggatgtgctggatgcg
gcgctcctacggcctggacgcttcgaccgccagatcaccgtggatcggcccagcttcaag
gggcgctacgagatcttgcgcgtgcatgcccgcaacaagaagctggcagaagaggtcagc
ctggaggccattgcccgccgcacccctggctttgccggcgccgatctggccaacctgctc
aacgaggcggccatcctggcggcccgccgtcagcacaaagccatcaccaaccaggacatc
gacgacgccatcgaccgcatcaccattggcctgaccaagccgccgctattagacggcaaa
agcaagcgcctcatcgcctaccacgagtgcggccatgctctgttgatgaccctcttgccc
catgcggatcccttgaacaaggtaacgatcatcccccgttccggaggtgccggcggcttt
gcccagcaactgcccaacgaggagcagatcgactccggcatgtacagccgcgcctggctg
ttggatcgggtggtggtcggttttggcggtcgggcggcggaggagatcgtctttggctac
tcggaagtgacgacgggggccagcaacgacctgcagcaaaacaccaacctggtgcggcaa
atggtgacccgctttggcatgtccgagctggggcccctgatgtgggatccgcccaacaac
gaaatctttttgggcggcggctggatgaaccgcgtcgagtactccgaagatgtggccgcc
aagatcgaccggcaggtgcggcaaatcctggagagctgctaccaaagagcgaagcaaatc
ctgctggagcaccgggcgctgctggatcgcctggccgacaccctggtggaacgggaaacc
ctagatggggacgagtttcgggccattgtggcagaatacgtgcccatccccgagaagatc
ggcttgcccagcccgaagacggcttga

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