Synechococcus sp. JA-3-3Ab: CYA_0008
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Entry
CYA_0008 CDS
T00318
Name
(GenBank) type II DNA topoisomerase, A subunit
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
cya
Synechococcus sp. JA-3-3Ab
Brite
KEGG Orthology (KO) [BR:
cya00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cya03032
]
CYA_0008
03400 DNA repair and recombination proteins [BR:
cya03400
]
CYA_0008
Enzymes [BR:
cya01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
CYA_0008
DNA replication proteins [BR:
cya03032
]
Prokaryotic type
DNA Topoisomerases
CYA_0008
DNA repair and recombination proteins [BR:
cya03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CYA_0008
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Striatin
Sec2p
FmiP_Thoc5
ATG14
Motif
Other DBs
NCBI-ProteinID:
ABC98241
UniProt:
Q2JY71
LinkDB
All DBs
Position
complement(7057..9606)
Genome browser
AA seq
849 aa
AA seq
DB search
MTQQLTLDGLGSGSGGGSRLGRVIVTDLQGEMQRSYLEYAMSVIVGRALPDVRDGLKPVH
RRILYAMHELGLTPDRPYRKCARVVGDVLGKYHPHGDQAVYDALVRMAQDFSSRYPLVAG
HGNFGSVDDDPPAAMRYTECRLAELSHTALLQGISEAIVDFMPNFDGSQAEPTVLPARLP
ILLLNGSAGIAVGMATNIPPHNLGEVVDGLLALIDEPDLSPEELLRWIPGPDFPTGGQIV
DGQGIREAYLTGRGSITLRGVARFEEIQPGRGRHRRPALIISEFPYQVNKAAWLEKVAEL
VAQDRLSGIADLRDESDRSGMRVVVELKREANPQAVLQQLYKLTPLQSTFGVILLALVEG
KPQQLSLKQILQHFLQFREATLKRMFRAELQQVQRKAEEVAGMVLALADLEGVIDLLRQA
PDSATAKAQLQTRLGCTSQQAETILAMPLRRLTTLERERLYQEQAELQARIAELQGLLQD
RRKLLNYLKKELRHLKKTFADPRRTQILSASELEAEAAQIPGGEAGEDSRFLLQLTRKGY
VRRLPLPGPRSRSNPAQRELGEDTLVSLECVTPEQAILVLTASGRAFTVPIEGIPLSTGS
SRGVPLVTLLPNPEPIVAAFPLDPVRVSGAEHSPGEASLVVLSRQGRIKRVALAELVGLS
QRGAAVLKLKEGDELGWAALWHPGHQGYSVVLATSGGRVLRLDAEQIPLMGRAAMGSPAL
RLGRTEQIVGMALLPPQGILVLASRSGYLKRLPLGEIPILEQGKVGVSAFHFSNKGDGLV
GLVGFPPDLAAHPHLQVDVIAESERVHSFSPEEIPLQGRSGGGSLLVKGEQVRELRLFWP
QWLPEGGIG
NT seq
2550 nt
NT seq
+upstream
nt +downstream
nt
atgactcagcaactgactctcgacggactgggatctggatcgggtgggggatcccgtcta
gggcgagtaatcgtaaccgatttgcagggggagatgcagcgctcctacctggaatatgcc
atgagcgtgatcgtggggcgggccttgccggatgtgcgggatggcctcaagccggtgcat
cgccgcatcctctacgccatgcacgagctgggcctgacgccggatcgcccctaccgcaag
tgcgcgcgcgtcgtgggggacgtgctggggaaatatcacccccacggggatcaggcggtc
tatgacgcgctggtgcgcatggcacaagacttttccagccgctaccccctggtggcgggg
cacggcaacttcggctcggtggacgacgacccgccggcggccatgcgctacacggagtgt
cggctggcggagctgagccacacagcccttctgcaggggatctccgaagcaattgtggac
tttatgcccaatttcgacggctcccaggcggagcccaccgtcctgccggcccgcctgccc
atcttgctgctcaacggctctgctggcattgccgtgggcatggccaccaacatcccgccc
cacaacctgggggaagtggtggacggcctgctggctttgatcgacgagcccgatctcagc
cctgaggagctgttgcgctggatcccggggccggactttcccaccggcggccaaattgtc
gatggccaggggatccgcgaggcctacctcaccggccgcggctccatcaccctgcgggga
gtggcccgctttgaggagatccagccgggcagaggacgccaccgccggcccgccctgatc
atcagcgagtttccctatcaggtgaacaaggctgcctggctcgagaaggtggccgagctg
gtcgcccaagaccgtctcagcggcatcgcagatttgcgggatgagtcggatcgcagcggc
atgcgcgtggtggtggagctgaagcgggaggccaacccgcaggcggttttgcagcagttg
tacaagctcacccccttgcagagcacctttggggtgatcctgttggccttggtggaggga
aaaccccagcagctcagcttgaagcagattttgcagcactttttgcaatttcgcgaggcc
actctcaagcggatgtttcgcgccgaactgcagcaggtacagcgcaaagccgaagaggtg
gcggggatggtgctggccctggccgatctggaaggggtaatcgacctgctgcggcaagcg
cccgatagcgccacggccaaagcccagctgcaaacccgcttgggctgcacctcccagcag
gcggagacgatcttggccatgcccctgcgccgcctgacaaccttggagcgggagcgcctc
tatcaagagcaagccgagctgcaggcccgcatcgccgagctgcagggactgctgcaagat
cgccgcaagctcttgaattacctgaaaaaagagctgcgacacttgaaaaaaacctttgcg
gatccccggcgcacccagattctctcggcctcggaactggaagcggaggcggcccagatc
cccggcggcgaagccggcgaagacagccgctttctgctgcaactcacccgcaaaggctac
gtgcgccgcctgcctctgcctgggcctcgctcccgcagcaacccggcgcagcgggaattg
ggagaagataccctggtcagcctggaatgcgtgaccccagagcaggcaatcttggtgctc
accgccagcggcagggctttcaccgtgcccatcgaagggatccccctcagcaccggctcc
tcgcggggggtgcctctggtcacccttctccccaaccccgagccgattgttgccgccttc
ccgttggatcccgttcgcgtcagcggtgcggagcactctcccggcgaggccagcttggtg
gtgctcagccggcaggggcggatcaagcgggtggccttggcggagctggtgggcctcagc
caacggggagccgccgtcttgaagctcaaagaaggagacgagctgggctgggcggccctt
tggcatcccggccaccaaggctacagcgttgtcctggccacctccggcgggcgggtgctg
cggctggacgccgaacagatccccttgatgggtcgggcagctatgggatccccagctcta
cgtttggggcgcacagaacagatcgtcggtatggcgctgctgcccccgcaagggatctta
gttttggccagccggtcggggtatttgaagcggctacccctgggcgagatccccatcctg
gagcagggtaaagtgggcgtgtcggcctttcacttctccaacaaaggggatggcttggtg
ggcttggtgggttttccccccgatctggcggcgcacccccatctgcaagtggatgtgatc
gcggagtccgagcgggtacactccttctctcctgaggaaattcccctgcaaggccggtcc
ggcggcggatccctgttggtcaagggggagcaggttagggagttgcgcctgttttggccg
cagtggctgccggagggcgggattggatag
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