Synechococcus sp. JA-3-3Ab: CYA_0203
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Entry
CYA_0203 CDS
T00318
Symbol
mutM
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
cya
Synechococcus sp. JA-3-3Ab
Pathway
cya03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cya00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CYA_0203 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cya03400
]
CYA_0203 (mutM)
Enzymes [BR:
cya01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
CYA_0203 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
CYA_0203 (mutM)
DNA repair and recombination proteins [BR:
cya03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CYA_0203 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Auto_anti-p27
DUF1631
Motif
Other DBs
NCBI-ProteinID:
ABC98427
UniProt:
Q2JXQ2
LinkDB
All DBs
Position
complement(208311..209162)
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AA seq
283 aa
AA seq
DB search
MPELPEVETVRRDLQRLTLGLCILSVEVLLPRTVAYPGKDEFAQGLAGSCLTQWQRRGKY
LLGSLDSGAVLGVHLRMTGQLLWVQGSAPLPIHTRVRLHLEQGWELRFVDLRTFGQMWLV
PAGVEPETVIPALQSLGPEPLSPAFSEAYFQAALQKSRRPIKAALLDQSLVAGVGNIYAD
EALFLSGIHPSTPAAQLSDAAKSRLRESLIQVLRAGLEQRGTTLRDYRDLRGLNGNYQGQ
AWVYGREGDPCRLCGTPIQRSKLSGRSAHFCPRCQPPPGRVET
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgagctgccggaagttgaaaccgtcaggcgggatctgcagcgcctcaccctgggt
ctgtgcatcctgtcggtggaggtgcttctccctcgcaccgtggcctaccccggcaaagac
gagtttgcgcaggggctggcaggcagctgtttgacccagtggcagcggcgaggcaaatat
cttctgggatccctggactctggagcggttctgggcgtgcatctgcgcatgaccgggcaa
ctgctctgggttcagggatccgcgcctttgccgatccacactcgcgtccggctgcatttg
gagcaggggtgggagctgcgctttgttgatctgcgcacctttggccagatgtggctggtg
cccgccggggtggagccggagacggtgatccctgccctgcagagcttggggccggagccg
ctttcgccggccttttccgaggcctatttccaagctgccttgcagaagagccgccgcccc
atcaaagccgccttgctggatcagtcgctggtggcgggggtgggcaacatctacgccgac
gaggccctgtttctgagcggcatccacccctcaacacccgccgcgcagctttccgacgct
gccaagagccgcctgcgagaaagcctgatccaggtgttacgggccgggctggagcagcgg
ggcaccaccctgcgggattaccgggatctgcgtgggctcaacggcaactaccaggggcag
gcgtgggtgtacggtcgagaaggggatccctgtcgcctctgtggcacccccattcagcgg
agtaagctctcgggccgctcggcccacttttgcccccgctgccagccgcctccaggccgg
gttgagacttga
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