Synechococcus sp. JA-3-3Ab: CYA_0216
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Entry
CYA_0216 CDS
T00318
Symbol
cpcF
Name
(GenBank) phycocyanin alpha subunit phycocyanobilin lyase, CpcF subunit
KO
K02289
phycocyanobilin lyase subunit beta [EC:
4.4.1.32
]
Organism
cya
Synechococcus sp. JA-3-3Ab
Pathway
cya00196
Photosynthesis - antenna proteins
cya01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cya00001
]
09100 Metabolism
09102 Energy metabolism
00196 Photosynthesis - antenna proteins
CYA_0216 (cpcF)
09180 Brite Hierarchies
09181 Protein families: metabolism
00194 Photosynthesis proteins [BR:
cya00194
]
CYA_0216 (cpcF)
Enzymes [BR:
cya01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.32 C-phycocyanin alpha-cysteine-84 phycocyanobilin lyase
CYA_0216 (cpcF)
Photosynthesis proteins [BR:
cya00194
]
Antenna proteins
Phycobilisome - Cyanobacteria, Red alga [OT]
Phycocyanin (PC)
CYA_0216 (cpcF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_2
HEAT_PBS
HEAT
Cnd1
TOR1L1_N
HEAT_EZ
PDS5
Adaptin_N
Motif
Other DBs
NCBI-ProteinID:
ABC98440
UniProt:
Q2JXN9
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All DBs
Position
complement(222992..223708)
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AA seq
238 aa
AA seq
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MGLSPPIGSLGCFVSFLLTLASGLSMSSSSAAQVLPAAVAQLAAELEQATSAEELLRVVR
ALGSLGHVEGIPLLIRAFGFNRPAVGEAALEEVLRFGEAAVGPLLANIDGFDYGARAYSV
RALARIGHGDAYPFLAEAIVADFAPSVRRAAARGLGQVAARRPLSDQERALHLLRQCLGD
ADWGVRYAAVGSLTDLARLGEASLRSAVEAALQMALQDADPLIPLRARLSQQELAADP
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
ttggggctctccccccctattggctcgcttggatgtttcgttagttttttacttaccttg
gcctctgggttgtctatgtcctcttcctcggctgcgcaagtgcttcccgctgctgtggct
caactggccgctgaactggaacaggccacctcagcggaagaactgttgcgggtggtgaga
gcgctgggatccttgggccacgtggaagggatccccctgctcattcgcgcctttggcttc
aaccgccctgccgtgggggaggccgcgctggaagaggtgttgcgctttggggaggcggcg
gtagggcctttgctggccaacatcgatggcttcgactatggggcgcgcgcctattcggtg
cgggcgttggcccgtatcggccacggcgatgcctacccctttttggcggaagccattgtg
gcggacttcgcccctagcgtgcggcgagcggcggcccgtgggctgggacaggtagcggca
cggcggcccctctccgatcaagagcgagccttgcacctgttgcggcaatgcctgggcgac
gccgactggggagttcgctatgccgccgtcggatccctgacggatttggctcggctggga
gaggcgtccctgcgatctgccgtcgaggcagccctgcaaatggccttgcaggatgcggat
cccttgattcccctacgcgcccgcctaagccagcaggagctggctgctgatccataa
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