Synechococcus sp. JA-3-3Ab: CYA_0466
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Entry
CYA_0466 CDS
T00318
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
cya
Synechococcus sp. JA-3-3Ab
Pathway
cya03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cya00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CYA_0466 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cya03400
]
CYA_0466 (xth)
Enzymes [BR:
cya01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
CYA_0466 (xth)
DNA repair and recombination proteins [BR:
cya03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
CYA_0466 (xth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
ABC98684
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All DBs
Position
480687..481472
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AA seq
261 aa
AA seq
DB search
MQVATWNVNSIRTRLPQVLAWLDKQGSLDVLCLQETKVVDAEFPRAPFEERGFHVEVYGQ
KAYNGVALISREVPEKVERGFAALLPAAAELDEQKRLIGGLYRGIRILNLYVPNGEAVGS
DKYAYKLRWLACLKDYLQVALDQGQPILLCGDFNIAPEDRDIYDPGKAGEIMASEPERQA
LQKILALGFEDAFRKFNPDPGHFSWWDYRGGGFQKNRGWRIDHLYLSPLLQDKATACWID
VEPRRAEKPSDHAPVVVELAV
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atgcaagtggccacctggaacgtcaactccattcgcacccggctgccccaggttttggct
tggctggacaagcagggatccctggatgtgctctgcctgcaggagaccaaggtggtggat
gcggagtttccccgtgccccctttgaggagcggggcttccatgtggaggtgtacgggcag
aaagcctacaacggcgttgccctcatcagccgggaggtgccggaaaaggtggagcggggc
tttgctgccctgctgccggcagccgcagagctggatgagcaaaagcggcttattggcggc
ctctaccgcggcatccgcatcctcaacctctacgtgcccaatggcgaggcggtgggatct
gacaagtacgcctacaagttgcgctggctggcctgcctgaaagactacctccaggtggcc
ctcgaccaagggcagcctattctgctctgtggcgacttcaacatcgccccggaagatcgg
gatatctacgatcccggcaaagccggagaaatcatggcctctgagccggagcggcaggcc
ctgcagaagatcctggctttgggctttgaggatgcctttcgcaagtttaacccggaccct
ggacattttagctggtgggactaccgcgggggtggattccagaagaatcggggctggcgc
attgaccacctctacctttcccccttgcttcaggacaaagctacggcttgctggatcgac
gtcgagccgcggcgggcagaaaagcccagcgaccatgcccctgtggttgtggagctggca
gtctaa
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