Synechococcus sp. JA-3-3Ab: CYA_0939
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Entry
CYA_0939 CDS
T00318
Name
(GenBank) penicillin-binding protein
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
cya
Synechococcus sp. JA-3-3Ab
Pathway
cya00550
Peptidoglycan biosynthesis
cya01100
Metabolic pathways
cya01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
cya00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
CYA_0939
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
CYA_0939
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
cya01011
]
CYA_0939
Enzymes [BR:
cya01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
CYA_0939
Peptidoglycan biosynthesis and degradation proteins [BR:
cya01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
CYA_0939
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
IF2_N
Motif
Other DBs
NCBI-ProteinID:
ABC99141
UniProt:
Q2JVU0
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All DBs
Position
948786..950765
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AA seq
659 aa
AA seq
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MLRGPVQERASPLDFGCIGCNSSGKFMAKLYPVSNAARSPHTLAGRDPKALFSPHSRPPA
PRRVLPPPPPDGGSPRWLGSASAKTVGQGYRAVVLLLLTSLLLFGGLGSRLAYLQLVRTQ
YYRQLADTNRIRLLPQPPERGRIVDRNGVLLAGSQLSHSVFLWPLVQSRQGWQETIPKLA
RSLNMAPEEIAQKLEQAGYRSPFPVRILRNASPQVVTQLEEMSRELPGVMVEAETVRFYP
HGDLAAHLLGYTGEIPLEQLRADPSYRLGDIVGLMGVEELFESHLRGQWGGRQVEVDAMG
EVLRVLGEQAPRPGNTLQLTLDVRLQQAAEQALGQQKGAVVAMDPRDGSILAMASYPTFD
PNLFSSRITQAQWESLQQRDFPFLNRALRPYPPASTYKIVTTAAGIESGAFPPDTVLQTG
PYIQVGGWRFWDWNRAGFGRLNYRQAMAYSSDTFFYQIALGTKAAPLQEWSRRFGLGQLT
GIGLKGEAAGLVPDAEWKQRHWREPWYVGDTVNMSIGQGFITATPLQMAVVTAAVANGGW
RVRPLLSQQVIPESPVPLRQKVGLSPATLEILQQGLRDVVVYGTGGNANLGPGFPPTAGK
TGTAEDPPRRSHAWFVGYAPYDRPELVVVVFLENSGGGGGSRAAPIFREVMRAYFQRDS
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atgctgagagggcccgtccaagagcgggcatctcctcttgattttgggtgtatcggttgc
aattcttctggcaagttcatggccaaactctaccccgtcagcaacgccgcgcgaagcccc
cacaccttggcaggacgggatccaaaagccctgttctccccccattccagaccgcctgcc
ccccgccgggtgcttcccccacccccgccggacggcggtagccctcgttggctgggatcc
gcatcggccaaaacggtggggcagggctatcgggccgttgtcttgcttttgctgaccagt
ctgctgctgtttggagggctgggatcccgcctggcctacctgcaactggtgcgcacccag
tattaccgccagttggccgataccaaccgcattcgtctcttgccccagccgccggaacgg
gggcgcattgtggatcgcaacggcgtgttgttggcgggcagccagctctcccactcggtc
ttcctgtggccgctggtgcaatcgcggcagggctggcaggagacgatccccaagctggcc
cggtccttgaacatggctcccgaagagattgcccaaaaactggagcaggcgggctatcgc
tccccgtttccggtgcgcatcctgcgcaacgccagcccccaggtggtcactcaactggaa
gagatgagccgcgagctgccgggggtgatggtggaggcagagacggtgcggttttatccc
cacggcgacttggccgctcatctgctgggctataccggcgagatccccctagagcaactg
cgggcggatcccagctatcgcctgggggatatcgtcggcctgatgggcgtggaggaattg
ttcgagagccatctgcgcggccaatggggcgggcgccaggtggaggtagacgccatggga
gaagtgctgcgggtgctgggagagcaagcgcctcgaccgggcaacaccctgcagctgact
ttggatgtacgcctgcagcaggcagcggagcaggccctgggccagcagaaaggagcagtg
gtcgccatggatccccgcgacggctcgatcctggccatggccagctatcccacctttgat
cccaacctcttttccagccgcatcacccaagcccagtgggagagcctgcaacagcgggac
ttccccttcctcaaccgcgccctgcggccctatccccccgccagcacctacaaaatcgtc
accaccgccgccgggatcgagtcgggagcctttcccccggatacggtgctgcagaccggc
ccctacatccaggtgggcgggtggaggttctgggactggaaccgggccggtttcgggcgg
ctgaactaccgccaggcgatggcctacagcagcgacaccttcttctaccaaattgccctg
ggcaccaaggccgcccccctgcaagaatggtcgcgccgcttcgggctggggcaattgacc
gggatcggcctcaaaggggaagctgctgggctggtgcccgacgccgagtggaaacagcgc
cactggcgcgagccctggtacgtgggcgatacggtcaacatgtccatcggccagggattt
atcaccgccacgccgctgcagatggcggtggtaacagcagcggtggccaacggcggctgg
cgggttcgccccttgctctcgcagcaggtgatcccggaaagccccgtgcccctgcggcag
aaggtgggtctttcccccgccacgctggagatcctgcagcaggggttgcgggatgtggtg
gtctacggcaccggcggcaacgccaacctggggccgggctttccccccaccgccggcaaa
accggcaccgccgaggatccgccgcggcgctcccacgcctggtttgtcggctatgccccc
tacgaccggcccgaattggtagtcgtggtctttctggaaaacagtggcggcgggggtgga
tcccgggccgccccgatcttccgcgaggtgatgcgggcctacttccaacgtgactcgtga
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