Synechococcus sp. JA-3-3Ab: CYA_1108
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Entry
CYA_1108 CDS
T00318
Name
(GenBank) transporter, outer membrane receptor (OMR) family
KO
K16092
vitamin B12 transporter
Organism
cya
Synechococcus sp. JA-3-3Ab
Brite
KEGG Orthology (KO) [BR:
cya00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cya02000
]
CYA_1108
Transporters [BR:
cya02000
]
Other transporters
Pores ion channels [TC:
1
]
CYA_1108
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
ABC99297
LinkDB
All DBs
Position
complement(1133198..1135141)
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AA seq
647 aa
AA seq
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MKVTVCLSLGLGILSLGIPAWGQAILDTGLSAEILNQPVTTPFRRPGLLRESSRPVYVIT
RQQMRQQGARTVQEALRYLPGILSDGTAGTQLGALSSQFMRGARTAQVLVLLDGRPLNDL
GFFGGFDLSQITTDVVERIEVSPGGGSTLYGSDAVGGVINIVTVEPQPETETVLEAAVGS
YGLNEQGIQSRGQAQDLGWVLSYRRLQSNNDFPFAIERLGKSGRRENSAVEYHNLQAKLT
WQLAEDQVLTANALYLNKAFRVPGSVEFPSPDAEQNTNDLLLDLSWLWTQETGSLQARVF
LDDLNYRFSAPQSQGSRDVILRNGWGSQLQYAWQAGENLEGVLGADYRSISARNTTFSFA
RGSANINYDDTVNQGALFARLDYSPDPQFHLDLGIRQDFSSLANGSATSPAVGIRWAVAE
GTTLRASYAGSFRTPLISELFFRLRGFFEVDGNPNLRPERGESLDIGLDQTLGDFGLLRL
TFAHNRIRDGITFVSLGPRRGTYENIGLVEYTGLEAALDLRLGENWTLFANYTLNDPIIR
AALNPATVGKELAFVGADSFNLGLSYRHEQGWYGSILVHHIGSFFTNNANTESLPGYTTV
ALRGGIPLAEALSLELGIDNLLDEQYEVFPGYPGVGRTLRVNLRGQF
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtaactgtatgtctcagccttgggctggggatcttgagtttggggatcccggcc
tgggggcaggcaatcttggataccggcctcagcgccgagattttgaatcaacccgtcacc
accccgtttcgccgtcccggcctgctgcgagagtcttcccgcccagtctatgtcatcacc
cgccagcagatgcgccagcaaggggcaaggacggtgcaggaagccctgcgctacttgccc
gggatcctcagcgatggcacagcgggaactcagttgggagctcttagctctcaattcatg
cgaggggcgcgaacggcgcaggtattggtgctcttggatggccgccctctcaacgatctg
ggttttttcggggggtttgacctctcgcaaatcaccaccgatgtcgtcgagcgaattgaa
gtctcccccggcggcggctctaccctgtacggctcagacgccgttggcggcgtgatcaac
atcgtcacggtggagccgcagccagaaacggagacggtgctggaagcggcggtcggcagc
tacggtctcaatgagcaagggatccaaagtcgcggccaagcccaggatctgggctgggtg
ctcagctatcgccgtctgcaaagtaacaacgactttccctttgccattgagcggctgggc
aagtcaggcaggcgggaaaactcggcggtggagtaccacaacttgcaggccaagctcacc
tggcaactggccgaagatcaagtcctaacagccaacgccctctacctcaacaaagccttt
cgcgtgcccggtagtgtagagtttccctctcccgacgcagagcaaaacaccaacgatctg
ctgctggatctcagttggctgtggactcaggaaacaggatccctgcaggcaagagtcttt
ttggacgatctcaactaccgcttcagcgctccgcaaagccagggatcccgcgacgtcatc
ttgcgcaatggctggggatcccagcttcaatatgcttggcaggccggcgaaaacctagag
ggagttttgggggcagattatcgctctatctcagcccgcaatacgactttttcttttgcc
aggggttctgccaatatcaactacgacgatacggttaaccagggggccctgtttgcccgc
ctggactacagcccggatccccagttccacctcgacctgggcatccgtcaggacttcagc
agtttggccaacggctcggccacctcgccggctgtggggatccggtgggcagttgccgag
ggaactaccttgagggccagctacgccggcagctttcgcactcccttgatctcggaattg
ttcttccggctgcgcggcttttttgaagtggatggcaaccccaatctccgcccagagcga
ggggagagcttggacatcggcctggatcaaaccttgggagattttggcctgctgcgctta
acttttgcccacaaccgcatccgcgatggcatcacctttgtcagccttgggccgcgccgg
ggaacctatgaaaatatcgggctggtcgaatataccggcctggaagcggctttagatttg
cgtttgggggaaaactggacgctttttgccaactataccctcaatgatcccatcatccgc
gctgcccttaacccggccacagttggcaaagagctagcctttgtaggagccgatagcttc
aatctaggcctaagctaccgccacgagcagggctggtacggctcgattttggtccatcac
attgggagcttttttaccaacaatgccaatacggaatccctgccaggctacaccaccgtg
gctctgcgcggcgggatcccgttggctgaggccctgagcctagagttggggatcgacaac
ctgctggatgagcagtatgaagttttccccggctatcccggagttggccgcacgctgagg
gtgaacttgcgggggcaattttag
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