Synechococcus sp. JA-3-3Ab: CYA_1321
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Entry
CYA_1321 CDS
T00318
Symbol
pcrA
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cya
Synechococcus sp. JA-3-3Ab
Pathway
cya03420
Nucleotide excision repair
cya03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cya00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CYA_1321 (pcrA)
03430 Mismatch repair
CYA_1321 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cya03400
]
CYA_1321 (pcrA)
Enzymes [BR:
cya01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CYA_1321 (pcrA)
DNA repair and recombination proteins [BR:
cya03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CYA_1321 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
CYA_1321 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
Viral_helicase1
ResIII
DEAD
AAA_16
AAA_11
AAA_22
AAA_12
Motif
Other DBs
NCBI-ProteinID:
ABC99498
LinkDB
All DBs
Position
complement(1336315..1338645)
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AA seq
776 aa
AA seq
DB search
MLDALNPAQRQAVHHFCGPLLVVAGAGSGKTRTLAYRIAHLIRHYRVDPEEILAVTFTNK
AAREMKERIEQLFAEQEAQEQFGIPLEELEPAQATRLKSAVYHRWIKPLWIGTFHSLFAQ
ILRLEIEKYQDPKGRKWTRNFSIFDESDAQSLVKEIVTKQLNLDERKFDPRSVRYAISNA
KNQGWTPADLERHQPNFRGRILAQVYELYEDQLAANNALDFDNLIWIPVQLFRQNEQVLA
YWHQRFRHILVDEYQDTNRTQYELIRLLATNGETRRSEWDWTNRSLFVVGDADQSIYRFR
GADFTILLEFQETFGDGLPDDDTRTLIKLEENYRSTATILQAANVLIEKNTERIDKILRP
TRPPGHPIVCYQAEDEMAEAEFVVNTIRRLHSQNPNSSWGDFAILYRTNAQSRPFEEVLL
RWGIPYTVVGGLRFYDRKEIKDVLAYLRVVLNPADSFSLLRIINVPRRGIGKSTLDKLSE
AAAALNVPLWTILSDEASVTNLLGRSAKPVLQFAQLIQHWHRQMAQVSAAALLEGLLRDC
GYLEDLKAQGTEEAEERIANVMELYNAARQFEEEQEDPSLEAFLSNVSLASDLDTLQEGA
EKVSLMTLHASKGLEFPVVFLVGLEQGLFPNFRALEDPAALEEERRLCYVGITRAREQLF
VCHASERRLYGNREPAIPSLFLSELPQELIQWEKGRGLSFSADNTAAATPKAKAARRQGR
SSQWAVGDRLQHPQFGQGQITHVFGSGERITLAVRFPAIGQQKILDPRIAPIQKLS
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
ttgttggatgccctcaaccctgctcaacggcaagcggtgcaccatttttgtggccctttg
ctggtggtggcgggggcaggttccggcaagacgcgcaccctcgcctatcgcatcgcccac
ctcatccgccactaccgggtggatccggaggagattttggccgtgacctttaccaacaag
gccgcccgtgagatgaaagagcgcattgagcagctctttgccgaacaagaagctcaagaa
caatttgggatccccttagaggaattggagccggcccaggcaacgcgactaaaatctgct
gtttaccaccgctggattaagcctctttggattggcacgttccacagcttatttgcccag
atcctgcgcctggagatcgaaaaatatcaggatcccaagggacgaaagtggactcgcaac
ttctcgattttcgatgaatcggacgcccaatccctggttaaagagattgtaactaagcaa
ctcaacttagatgagcgcaagttcgatccaagatcggtgcgctatgccattagcaatgcc
aaaaatcaaggttggacccctgccgatctggagcgccaccagcccaatttccgaggtcgc
atcctggctcaggtttacgagctctacgaagatcaactggcggccaataatgccctcgat
ttcgacaacttaatttggatcccggtgcaacttttccgccaaaatgagcaggttttggcc
tactggcaccagcgctttcggcacatcttggtggacgaataccaagataccaaccgcacc
cagtacgagctgatccggctcctggccaccaacggcgagacccgccgctccgagtgggac
tggaccaatcgctccctctttgtggtgggcgatgcagatcaaagcatctatcgctttcgg
ggggccgatttcaccattttgctggagtttcaagagacctttggcgatggcctgccggac
gacgatacccgcaccctgatcaaattggaagaaaactatcgctccaccgccacgattttg
caggcggctaacgtcctgattgagaaaaacaccgagcgcatcgataaaattctccggcca
actcgcccccccggccatcccatcgtttgctaccaggcggaggacgaaatggccgaggcc
gagtttgtggtcaataccatccggcgattacacagccaaaatcccaactcttcctgggga
gattttgccattctctaccgcaccaatgcccaatctcgcccttttgaagaggttttgctg
cggtgggggatcccttacacggtggtgggggggctgcgattttacgatcgcaaagagatt
aaggatgtgctggcctatttgcgggttgtgctcaaccctgccgattcttttagcctgttg
cgcattatcaatgtgccgcggcggggcatcggcaagtccactctggacaagctaagcgaa
gcggcggctgccttaaatgtgcccctgtggactatcctcagcgacgaggcctctgttacc
aacctgctggggcgttcggccaagccggttctccagtttgcccagcttatccagcattgg
cacagacagatggcccaggtttcggctgccgcccttctggaggggctgctgcgggattgc
ggctatctggaagatctcaaggcccagggcacagaagaggccgaggaaaggatcgccaac
gtgatggaactctacaatgccgcccgccaatttgaagaagaacaggaggatcccagcctc
gaggctttcttgagcaatgtgtctttagcttccgatttggacacccttcaggagggagct
gagaaagtttcgctaatgacgttgcatgcttccaaagggctggagttcccggtggtgttt
ttggtggggttggaacaaggcctgtttcccaattttcgcgctttggaggatcctgccgcg
ctggaagaagaacggcgcctctgctacgtgggcatcacccgcgcccgcgagcaattgttt
gtctgccacgccagcgagcggcggctctacggcaaccgcgagcccgccatcccttcccta
tttttgagtgagctgccccaagagctgatccaatgggaaaaaggcagggggctttcgttc
tccgccgacaacacggctgcggccacgcccaaagcaaaggctgctcgccgccaaggccgt
tcctcccagtgggccgttggggatcgcctgcaacatccccaattcggacaggggcaaatt
acccacgtgttcggcagcggcgaacggatcaccctggcggtgaggtttcccgccatcggc
cagcagaaaatcttggatccccgcatcgcgcccattcaaaagctcagctag
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