Synechococcus sp. JA-3-3Ab: CYA_1338
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Entry
CYA_1338 CDS
T00318
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
cya
Synechococcus sp. JA-3-3Ab
Brite
KEGG Orthology (KO) [BR:
cya00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cya03016
]
CYA_1338 (truB)
Enzymes [BR:
cya01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
CYA_1338 (truB)
Transfer RNA biogenesis [BR:
cya03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CYA_1338 (truB)
Prokaryotic type
CYA_1338 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
TruB_C
DKCLD
Methyltranf_PUA
Motif
Other DBs
NCBI-ProteinID:
ABC99514
UniProt:
Q2JUU3
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All DBs
Position
complement(1351048..1351947)
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AA seq
299 aa
AA seq
DB search
MGSLEGFLNLDKPAGLTSHDCVAVVRRVLRTRQVGHGGTLDPAATGVLPIAVGRATRFLA
FLSGDKVYRATFRFGQRSDTDDAEGQIQVGSPCPELSREQVEECLREFVGEIWQVPPLYS
AIKRQGKKLYELARAGAEAAELGLEPRRVVIRHLQILGWRSGEFPEVDLEIACGPGTYIR
ALARDVGEKLGCGGLMSRLRRLQSGPFRSEESLPLEQWQGSADPAAALLPIEWGFRSWNS
VFLSPAEAQRWRQGQAIPLDPAQATAETLRVMSGEGEFLGLGHSQAGQLKPLRVLLPDP
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgggatccctggagggctttctcaacctggataagccggccgggctcacctcccacgac
tgtgtggcggtggtgcggcgggtcttgcgcacccgccaggtggggcatggcggcactttg
gatccggcggcaacgggagttctgcccattgccgtggggcgggcgacgcgctttttggcg
tttttgtcgggggacaaggtctatcgggccacctttcgctttgggcagcgcagcgacacc
gacgatgccgaggggcagatccaggtgggatccccttgtccggagctgagccgcgagcag
gtggaggaatgtctgcgggagtttgtcggcgagatctggcaggtgccgcctctttacagc
gccatcaagcggcaggggaaaaagctctacgagctggcccgggccggggcagaggcggca
gaactggggctggagccgcggagagtagtgattcgacacctgcagatcttgggctggcgc
tctggcgagttcccggaagtggatctggagatcgcctgtggccccggcacctacatccgc
gccctcgcccgcgacgtgggggagaaattgggctgcggaggcttgatgagccgcctgcga
cggctgcaaagtggcccttttcgcagcgaagagagcctgcccctggagcagtggcaggga
tccgccgatcccgctgctgccctgttgccgattgagtggggatttcgcagttggaactca
gtattcttatctccggctgaggcgcagcgctggcgacaaggtcaggccattcctctggat
ccggctcaggccactgccgagaccctgcgggtcatgagcggagagggagaatttttgggc
ttggggcacagccaagcaggtcagctcaagccgctgcgggtgttgctgccggatccctag
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