Synechococcus sp. JA-3-3Ab: CYA_1407
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Entry
CYA_1407 CDS
T00318
Symbol
groL-2
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
cya
Synechococcus sp. JA-3-3Ab
Pathway
cya03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cya00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CYA_1407 (groL-2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cya03019
]
CYA_1407 (groL-2)
03110 Chaperones and folding catalysts [BR:
cya03110
]
CYA_1407 (groL-2)
03029 Mitochondrial biogenesis [BR:
cya03029
]
CYA_1407 (groL-2)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cya04147
]
CYA_1407 (groL-2)
Enzymes [BR:
cya01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
CYA_1407 (groL-2)
Messenger RNA biogenesis [BR:
cya03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
CYA_1407 (groL-2)
Chaperones and folding catalysts [BR:
cya03110
]
Heat shock proteins
HSP60 / Chaperonin
CYA_1407 (groL-2)
Mitochondrial biogenesis [BR:
cya03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
CYA_1407 (groL-2)
Exosome [BR:
cya04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
CYA_1407 (groL-2)
Exosomal proteins of other body fluids (saliva and urine)
CYA_1407 (groL-2)
Exosomal proteins of breast cancer cells
CYA_1407 (groL-2)
Exosomal proteins of colorectal cancer cells
CYA_1407 (groL-2)
Exosomal proteins of bladder cancer cells
CYA_1407 (groL-2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
ABC99577
UniProt:
Q2JUN7
LinkDB
All DBs
Position
1411963..1413597
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AA seq
544 aa
AA seq
DB search
MAKSIIFSEEARRALEHGMDILAEAVAVTLGPKGRNVVLEKKFGAPQIVNDGVTIAKEIE
LEDHIENTGVSLIRQAASKTNDTAGDGTTTATVLAHAMVKEGLKNVAAGANPIALKRGID
KAVKFLVDKIAEHARPVEDSKAIAQVAAISAGNDEEVGRMIAEAMDKVGREGVISLEEGK
SMTTELEVTEGMRFDKGYISPYFVTDTERMEAVLENPYILITDKKITLVQDLVPVLEQVA
RAGRPLLIIAEDIEKEALATLVVNKLRGVLSVVAVKAPGFGDRRKAMLEDIAILTGGEVI
SEERGLKLENARLDSFGSARRVTVTKDHTTIVAEGNEAAVKARCEQIRRQIEETDSTYDK
EKLQERLAKLSGGVAVIKVGAATETEMKDRKLRLEDAINATKAAVEEGIVPGGGTTLAHL
MPAVTEWAQANLSGDELVGAMLVARALGAPLRRIAENAGQNGSIVLERVKEKPFTVGYDA
QNDAYVDMFEAGIVDPAKVTRSALQNAASIASMVLTTEAIVVDKPEPKSNKPAGGGGGVD
DYDY
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atggccaagtcgatcatttttagcgaagaagcccgtcgtgcccttgaacacggcatggac
attttggcggaagctgtagccgttactctcggccccaaagggcgcaacgtcgtcctggag
aagaagtttggcgcaccccaaattgttaacgatggggtaaccatcgccaaagagatcgag
ctggaagaccacattgaaaacactggcgtctccttgatccgtcaggcggcttccaagacc
aatgacacggctggggacggcaccaccaccgccaccgtcctggcccacgccatggttaaa
gaagggctgaaaaacgtggccgccggcgccaacccgattgccctcaagcgcggcatcgac
aaagccgtgaagttcctggtggacaagatcgccgaacatgcccgcccggtggaagactcc
aaagccattgcccaggtggcggccatttccgccggcaacgatgaggaagtgggccgcatg
atcgccgaggccatggacaaagtgggccgcgaaggggtgatctccttggaagaaggcaag
tccatgaccactgagctggaagtgacggaggggatgcgctttgacaaaggctacatctcc
ccctacttcgtcaccgacacggagcggatggaggcggttctggaaaacccctacatcctg
attaccgataagaaaatcaccctggtacaagacctggtgccggtgctggagcaagtggcc
cgcgccggtcgtccgctgctgatcatcgccgaagacatcgagaaagaagccctggccact
ctggtggtgaacaagctgcggggcgtgctgagcgtggtggcggtgaaagcgcctggcttt
ggggatcgccgtaaggccatgctggaagacatcgccatcctcactggcggtgaggtcatc
agcgaagagcgcggcctgaagctggagaacgcccgtctcgactccttcggctcggcccgt
cgcgtcacggtaaccaaagaccacaccaccatcgtggccgaaggcaacgaagcggctgtc
aaagcccgctgtgagcaaatccgtcgccaaattgaagaaaccgactccacctacgacaaa
gaaaaactgcaagagcgcctggccaagctctccggcggtgtggcggtgatcaaagtgggc
gcggccaccgaaactgagatgaaggatcgcaagctgcgcctggaggacgccatcaacgcc
accaaggcggcggtggaagaggggatcgtccccggcggcggcactaccctggcgcacctg
atgccggcggtaacggagtgggcgcaggccaacttgtccggcgatgagctggtaggggcc
atgctggttgcccgcgcgctgggcgctccgctgcgccgcattgccgagaatgccggccag
aacggctcgatcgtgctggagcgggtgaaagagaaacccttcacggtgggttacgacgcc
cagaacgacgcctatgtggatatgtttgaggcgggcatcgttgacccggccaaagtcacc
cgctctgccctgcaaaacgctgcctcgattgccagcatggtgctcaccaccgaggccatc
gtggtagacaagccggagcccaagagcaacaagcccgctggcggtggcggcggcgtggat
gactacgactactaa
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