Synechococcus sp. JA-3-3Ab: CYA_1451
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Entry
CYA_1451 CDS
T00318
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
cya
Synechococcus sp. JA-3-3Ab
Pathway
cya03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cya00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CYA_1451 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cya03021
]
CYA_1451 (rpoA)
03400 DNA repair and recombination proteins [BR:
cya03400
]
CYA_1451 (rpoA)
Enzymes [BR:
cya01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CYA_1451 (rpoA)
Transcription machinery [BR:
cya03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CYA_1451 (rpoA)
DNA repair and recombination proteins [BR:
cya03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CYA_1451 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
HHH_2
Motif
Other DBs
NCBI-ProteinID:
ABC99619
UniProt:
Q2JUJ5
LinkDB
All DBs
Position
complement(1456191..1457186)
Genome browser
AA seq
331 aa
AA seq
DB search
MMQTSRTLHNLGSKAASSAAPYQTECVESHQEANGVHYGKFALGPLERGQGITVGNALRR
VLLSNLEGTAVTAVRIAGVTHEFSTVPGVREDVMEILLNMKELVLRSNAPDTQVGRLVAQ
GPGEVTAEKLQLPSEVEVINPRHHIATLAEGAILEMEFMIGRGRGYRAVDYSDSKSMAID
FLQIDSVFMPVRKVNYTVEAARVGQSLEKDRLILEIWTNGSLTPQEALSQAARILVGLFS
PLQEVSFDTPPEPRQAEDNQKNQIPIEELQLSVRAYNCLKRAQINTVADLLVYTEEDLLE
IKNFGQKSAEEVVQALKNRLGLTLPRERSKT
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgatgcagaccagccgaaccctccacaatctgggcagcaaagccgcttctagtgctgct
ccctaccagaccgagtgcgtcgaatcccatcaggaagccaatggcgttcactacggcaaa
tttgccctggggccactggagcggggtcaagggatcacggtgggcaacgccctgcggcgg
gtgttgctctccaacctagaagggacggcagtaaccgctgtacgcattgccggggtgacc
cacgagttttccacggtgccgggggtgcgggaagacgtgatggagatcctactcaacatg
aaggagctggtgctgcgctccaacgctcccgacacgcaggtgggccgtttggtggcacaa
gggccgggagaggtgaccgccgagaagctgcaattgcccagcgaggtggaagtgatcaac
ccccgccatcacattgccaccttggcggaaggggcgatcctggaaatggagttcatgatt
ggccgcggacgtggctaccgtgccgtcgattactccgacagcaaatcgatggccatcgac
tttctccagatcgactccgtcttcatgccggtgcgcaaagtcaactacaccgttgaggcg
gcgcgggtgggacaatctctggaaaaagatcgcctaattttggagatttggaccaacggc
agcctcaccccccaggaggccctcagccaggcggctcgcattttggtgggcctgttctcg
ccgctgcaggaggtcagcttcgacaccccgccagagccccggcaagctgaggataaccag
aagaaccagatccccatcgaagagctgcagctctcggtacgggcttacaactgcctgaag
cgcgctcaaatcaatacggtggcggatctattggtttataccgaagaggatttgctggag
atcaaaaacttcggccaaaaatccgcggaagaggtggtgcaagctttgaagaaccgccta
ggcctaaccttgccccgcgaaaggagcaagacgtag
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