Synechococcus sp. JA-3-3Ab: CYA_1893
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Entry
CYA_1893 CDS
T00318
Name
(GenBank) peptide/opine/nickel ABC transporter (PepT) family, ATP-binding protein
KO
K02031
peptide/nickel transport system ATP-binding protein
K02032
peptide/nickel transport system ATP-binding protein
Organism
cya
Synechococcus sp. JA-3-3Ab
Pathway
cya02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
cya00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CYA_1893
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cya02000
]
CYA_1893
Transporters [BR:
cya02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
CYA_1893
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_21
AAA_22
SMC_N
NACHT
AAA_16
PRK
nSTAND3
MobB
ATP-synt_ab
AAA_5
NB-ARC
Mg_chelatase
TniB
SbcC_Walker_B
AAA_18
ResIII
Motif
Other DBs
NCBI-ProteinID:
ABD00040
UniProt:
Q2JTF7
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All DBs
Position
complement(1900194..1901972)
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AA seq
592 aa
AA seq
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MADVAPVVTSALLTVQGLRVFLPSRTAGSQAECLGSPVVDGLSFQLGAGQVLGLVGESGS
GKTITALTLMDLLPSSARVEGTILFQGPQGTVDWLRLDPRQRRRYRGSQIAMIFQEPSTA
LNPLYTCGQQLRETLRAHTSLPPAELRAQAIRLFEEVQLSPQMLERYPHQLSGGQIQRAA
IACAIASNPKLLIADEPTTALDVTVQAEILRLLRDLQQQRQMAILFITHDLNLVAELADQ
VVVMCRGQAVEQGSVKQIFWDPQHPYTRGLLACRPPLERRLRRLPTVQDFQEKGGSLEER
WQQLEIPAAEEEERLRQICSQPPLLQVRELRTHYAVRRGPLGRQVGEIRAVDGISFDLYP
GETLGVVGESGCGKTTLGRTLLRLIRASSGQVIYDGEDWLRLPPRRLRRLRREIQLIFQD
PAASLDPRMSVGASVMEPMVLHGMGRNAAERRARAQRLFERVGLDPEALDRLPHQFSGGQ
RQRICIARALASEPRLLVCDEAVSSLDVSVQAQVLNLLKDLQEELGLTYLFISHDLSVVK
FMSDRILVMNRGRIEEIGPAAQIYRNPQQDYTRRLIAAIPKGDPKKRARQAG
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atggccgatgtcgctccggttgtcacttctgcccttctgactgttcaggggttgcgggtt
ttcttgcccagccgcactgccggcagccaggcagaatgcttgggatccccggtggtggat
gggctgtcctttcaactgggggccggacaagtcctgggcttagtgggggaatccggatcc
ggcaagaccataaccgccctgacgctgatggacttgctgcccagctccgctcgggtggaa
ggcaccattctcttccagggcccccagggaacagtggactggctgcggctggatccccgg
caacggcggcgctaccgcggctcccagatcgccatgatcttccaagagccgagcaccgcc
ctcaaccccctctacacctgtggccagcagttgcgggaaaccctgagggcccacacctcc
ctccccccagcggagctccgcgcccaagccatccgcctgtttgaggaagtgcagctttct
ccccagatgctggagcgctatccccatcagctctccggcggccagatccagcgggcggcc
atcgcctgtgccatcgcctctaaccccaagctgttgattgctgatgagccgactaccgcc
ttggatgtaacggtgcaagccgagatcttgcgcctgctccgggatctgcagcagcagcga
cagatggcgatcctcttcatcacccacgacctcaatttggtggcggaattggcggatcag
gtggtggtgatgtgccggggccaagccgtggaacaaggatcggtgaaacagatcttttgg
gatccccagcacccctacacccgcggcctgctggcctgtcgcccaccgttggagcggcgg
ttgcggcggctgcccaccgtccaggatttccaggaaaaggggggatccctcgaggagcgg
tggcagcaactggagatcccagccgccgaagaggaagaacggctgcgccagatatgcagc
cagccccctctgttgcaggtgcgggagttgcgcacccactatgccgtccgtcgcgggcca
ttgggccgccaggtgggcgagatccgagctgtggacgggatcagcttcgacctgtatcca
ggcgaaaccctgggggtggtgggcgagtccggctgcggcaaaaccaccctggggcgaacc
ctgttgcgtctaatccgcgccagttccggccaggtaatctacgacggagaagactggctc
cgcctgccgcctcggcgcctgcgccgcttgcgccgcgagatccagcttatctttcaggat
ccggcagcctctttggatccgcgcatgagtgtgggagccagcgtcatggagccgatggtg
ctgcacgggatggggagaaacgccgccgagcggcgagcacgagcccaacgcctgtttgaa
cgagtcgggttggatcccgaggcgctggatcgtctgccccaccagttttccggcgggcag
cggcagcggatttgcatcgcccgcgccctggcttcggagccgcgcctgctcgtctgcgac
gaggcagtgtcttccctggatgtctccgtacaggcccaggtgctgaacttgctcaaggat
ctgcaggaggagctgggactgacctatctgttcatctcccacgacctgagcgtggtcaag
ttcatgagcgaccgcattctggtcatgaaccgaggccgcatcgaagaaattggccctgcc
gctcagatctaccggaacccgcagcaggactatacccgccgcctcatcgccgccattccc
aaaggggatccgaaaaagcgtgcccgccaagccggatga
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