Synechococcus sp. JA-3-3Ab: CYA_1917
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Entry
CYA_1917 CDS
T00318
Symbol
ybbB
Name
(GenBank) YbbB protein
KO
K06917
tRNA 2-selenouridine synthase [EC:
2.9.1.3
]
Organism
cya
Synechococcus sp. JA-3-3Ab
Brite
KEGG Orthology (KO) [BR:
cya00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cya03016
]
CYA_1917 (ybbB)
Enzymes [BR:
cya01000
]
2. Transferases
2.9 Transferring selenium-containing groups
2.9.1 Selenotransferases
2.9.1.3 tRNA 2-selenouridine synthase
CYA_1917 (ybbB)
Transfer RNA biogenesis [BR:
cya03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
CYA_1917 (ybbB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rhodanese
AAA_33
AAA_18
AAA_22
AAA_28
cobW
NACHT
RsgA_GTPase
AAA_16
ABC_tran
Adeno_IVa2
ORC-CDC6-like
AAA_30
AAA_5
T2SSE
Motif
Other DBs
NCBI-ProteinID:
ABD00063
UniProt:
Q2JTD4
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All DBs
Position
complement(1927378..1928427)
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AA seq
349 aa
AA seq
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MSPPIHFTAEPWLHTYSEIIDVRSPAEFAEDHWPGAINLPVLDDAERAEVGTLYRQVDPF
TARKRGASLVAQNIARHLQTHFADKGRDYHPLIYCWRGGQRSASLALVLSQVGWQVTVLQ
GGYKTYRAWVRRQLQTLPQEFTYRVLCGPTGSGKTQLLRHLQQRGAQVLDLEKLACHRGS
VLGAEWGVPQPSQKSFESQLVQAFLQWDPAKPVWVESESAKVGQLHLPPALWQAITQADC
VEVQLPLEERVKGLIAHYPHWIAHPQALKEKLLSLKSRYGQACLQRWFELIDAQDWPQFV
RELLQQHYDPTYRHGLQQHFNRIRARLELPDLSESSLQEAAVRLRGMSF
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
gtgtctcctccgattcacttcactgcagagccctggctgcacacctacagcgaaattatc
gatgtgcgctctccggcagagtttgccgaagaccattggccgggggccatcaacttgccc
gtgctcgacgatgcagaacgggcagaggtgggcaccctctacaggcaagtggatcccttt
acagcccgcaagcggggggccagcctggtggcccagaacatcgcccgccatttgcagacc
cactttgccgacaagggccgggactaccaccccctcatctactgttggcggggcgggcag
cgctcggccagtctggcgctggtgttgtcccaggtgggctggcaggtaaccgtcttgcaa
ggggggtacaaaacctaccgcgcctgggtgcgccgacaactgcagactttgccccaggag
tttacctaccgcgtcctctgcgggccaacggggagcggcaaaacccagttgctgcgccat
ctgcagcagcggggagcccaagtcctcgatctggaaaagctggcctgccaccgcggatcg
gtgctgggggccgagtggggggtgccacagcccagtcagaagagctttgaaagtcaactg
gtgcaggcctttctccagtgggatcccgccaagccggtctgggtggagtcggaaagtgcc
aaagtgggccagcttcatttgccccctgctctttggcaggccatcacccaagccgactgc
gtagaggtgcagttgcctctagaagaacgggtgaaggggttgatcgcccactatccccac
tggatagcccacccccaggcgctaaaggaaaaattgctgtctttgaagtcccgctacggc
caggcctgtttgcagcgctggtttgagctcatcgacgcccaagactggccgcaatttgtg
cgggagctactgcagcagcactacgatcccacctatcgccacggcctgcagcaacacttt
aaccgtatccgcgctcgccttgagctgcctgacctctccgagagcagcctacaggaggcc
gctgtccgactcagggggatgtcgttttga
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