Synechococcus sp. JA-3-3Ab: CYA_2098
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Entry
CYA_2098 CDS
T00318
Symbol
gcvP
Name
(GenBank) glycine dehydrogenase
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
cya
Synechococcus sp. JA-3-3Ab
Pathway
cya00260
Glycine, serine and threonine metabolism
cya00630
Glyoxylate and dicarboxylate metabolism
cya00670
One carbon pool by folate
cya00785
Lipoic acid metabolism
cya01100
Metabolic pathways
cya01110
Biosynthesis of secondary metabolites
cya01200
Carbon metabolism
Module
cya_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
cya00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
CYA_2098 (gcvP)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
CYA_2098 (gcvP)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
CYA_2098 (gcvP)
00670 One carbon pool by folate
CYA_2098 (gcvP)
Enzymes [BR:
cya01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
CYA_2098 (gcvP)
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Gene cluster
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Motif
Pfam:
GDC-P
GcvP2_C
Beta_elim_lyase
Aminotran_5
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
ABD00238
UniProt:
Q2JSX6
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All DBs
Position
2113505..2116435
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AA seq
976 aa
AA seq
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MSDSTILHPLSPSGRETPQPLSAVDAELELLEQRELFLWRHIGPDAQQIRQMLHALGLSS
LRELVDKAVPAAIRSSRPLGLGSPCSEQQVLAELRAMAAQNQVWRSFLGMGYSNCLTPPV
IQRNILENPGWYTQYTPYQAEIAQGRLEALLNFQTMVIDLTGMEIANASLLDEATAAAEA
MSLAYTLAGKQSPVFWVDRGCHPQTIAVVQTRAEPLGIQVRVADPSQLELENGFGLLLQY
PNTYGEIRDYRELVERAHQRGMVVAVAADLLSLTLLQPPGEWGADIVVGSTQRFGVPLGY
GGPHAAYFATREAHKRLLPGRLVGISQDAQGRPALRLALQTREQHIRRDKATSNICTAQV
LLAVVASMYAVYHGPRGLRQIAERIHRQAHHLAAAIRQLGYRVGPEYFFDTFWVRAESPA
QVGQIQERAAQRRINLRRIDEMTLGISLDEATTAQDLRDLWQIFAGSEEPAWDVEGLGLD
ANQSLPPQLLRTTPYLTHPVFNRHHSETELLRYIHRLQSRDLSLVHSMIPLGSCTMKLNA
TAEMLPMTWPEFAQLHPFVPLEQARGYQTLFAQLEQMLAEITGFAGVSLQPNAGSQGEYA
GLLAIRRYHQARGESQRQVCLIPTSAHGTNPASAVMAGMQVVSVACDRAGNIDLEDLRAK
VEQHRERLAALMITYPSTHGVFEEGIRQICQMIHEAGGQVYMDGANLNAQVGLCRPAELG
ADVCHLNLHKTFCIPHGGGGPGVGPIAVARHLLPHLPGHPFLPGCNGPVSAAPWGSASIL
PIAWAYIRLMGSAGLTLATQVALLNANYIAKRLDPYYPVLYKGPGGWVAHECILDLRPLK
KSAGIEVEDVAKRLMDYGFHAPTISWPVPGTMMVEPTESESLEELDRFCEAMIAIRQEIA
AIERGEMDPVRNPLKLAPHTAEVVAADHWDRPYPRSLAAYPLPWVKERKFWPSVSRIDNA
YGDRHLVCSCQPWLEG
NT seq
2931 nt
NT seq
+upstream
nt +downstream
nt
atgtccgactccaccatcctccatcccctcagcccctctggacgggagacgcctcaaccc
ctctctgccgtcgatgccgagctggagctgctagagcagcgagaactcttcctctggcgg
cacatcgggccggacgcccagcaaatccgtcagatgttgcacgccttagggctgagctct
ctacgggaattagtggataaggcggtaccggcggccatccgcagcagccgacccctgggc
ctgggatccccctgcagcgagcaacaagtattggcggagctgagggcgatggcggcccag
aaccaggtgtggcgctcctttttgggtatgggctattccaactgcctgacgccgccggtg
attcagcgcaacattctggagaaccccggctggtacacccagtacaccccctaccaggcg
gagatcgcccaggggcggctagaggccctgctcaatttccagacgatggtgatcgatcta
acaggcatggagatcgccaatgcctccctgctggacgaagccactgccgccgccgaagcg
atgagcctggcctacaccttagcgggcaagcaatccccagttttttgggtggatcgcggc
tgccatccccagacgattgccgtcgtgcagacgcgggcagagcccttggggatccaggtg
cgtgtggccgatccttcgcagttggagctggagaacggctttggattgctcttgcagtat
cccaacacctatggagagatccgggattaccgcgagctggtggagcgggcccaccaaagg
gggatggtggtggccgtagctgccgacttgctcagcctgactctcctgcagccgccggga
gaatggggggcggacatcgtggtgggatccacccagcgctttggggtgcccctgggctac
ggcggcccccatgccgcctactttgccactcgcgaggcccacaaacggctgctgccgggg
cgcctggtggggatctctcaggatgctcagggcaggccggccctgcgcctggctctgcaa
acccgggagcagcacatccgccgcgacaaggccaccagcaacatctgcaccgcccaggtg
ctcttggccgtggtggcctccatgtatgccgtctatcacggcccccgaggcctgcggcaa
atcgccgaacgcatccaccgccaggcccatcacctagcggccgcgattcgccagctgggc
tacagggtggggccagagtatttcttcgacacgttttgggtaagggcagagtcccccgcc
caggttgggcagatccaagagcgggccgcccagcggcgcatcaacctgcgccggatcgac
gagatgaccctggggatcagcttggacgaggccaccaccgctcaggatctgcgcgatctc
tggcagatctttgccggctctgaagagccagcctgggatgtcgagggcctgggtttggat
gccaaccaaagcctgcccccccagctcttgcgcaccactccctacctcacccatccggtg
ttcaaccgccaccactcggaaacggagctgctgcgctacatccaccgcctgcagagccgg
gatctctcccttgtccactccatgatccccttgggctcctgcaccatgaagctgaacgcc
acagccgagatgctgccaatgacctggccggagtttgcccagctccatccttttgtgccc
ctggaacaagctcgcggctatcaaaccctctttgcccagttggagcagatgctggcggag
atcacgggctttgccggcgtctccctgcagcccaacgccggctcccagggggaatacgcc
ggcttgctggccattcgccgctaccaccaggcgcgaggggaaagccagcggcaggtgtgc
ctgatccccacctctgcccatggcaccaaccccgccagcgctgtcatggctgggatgcag
gtggtgagcgtggcctgcgacagggccggcaacatcgacctcgaagacctgcgggccaag
gtggagcagcaccgggaacgcctggctgccctgatgattacctacccctccacccatggg
gtgtttgaggaagggatccgccagatttgccagatgatccacgaggccggggggcaggtg
tacatggatggggccaacctcaacgcccaggtgggcctctgccgtcctgcggagctgggg
gccgatgtctgccacctcaacctgcacaagaccttctgcatcccccacggcggcggcggg
ccgggggtggggcccattgccgttgcccgtcatctgctgccgcatttgcccggccacccc
tttttgcccggctgcaacggcccggtcagcgccgccccctggggcagtgccagcatcctg
cccattgcctgggcctacatccgcctcatgggatccgccggccttaccctagctacccaa
gtggccctcctcaatgccaattacatcgccaagcggctggatccctactacccggtgctc
tacaaagggccggggggatgggtggcccacgagtgcatcctggacctgcgccccctcaag
aaaagcgccggcattgaggtggaggatgtagccaagcggctaatggactacggcttccac
gcccccaccatctcctggccggtgccggggacaatgatggtggagcccaccgagagcgaa
tccctagaagagctggatcgcttctgtgaggcaatgatcgccattcgccaggagattgct
gccatcgagcggggcgagatggatcccgtgcgcaatccccttaaacttgccccccacacc
gccgaggtagtggccgccgaccactgggatcgcccctaccctcgctccctagccgcctat
cccctcccgtgggtcaaggagcgcaagttctggcccagcgtcagccgcattgacaacgcc
tacggggatcgtcacctggtgtgcagttgtcagccctggctggaaggctaa
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