Synechococcus sp. JA-3-3Ab: CYA_2218
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Entry
CYA_2218 CDS
T00318
Symbol
pnpA
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
cya
Synechococcus sp. JA-3-3Ab
Pathway
cya03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cya00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CYA_2218 (pnpA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cya03019
]
CYA_2218 (pnpA)
03016 Transfer RNA biogenesis [BR:
cya03016
]
CYA_2218 (pnpA)
Enzymes [BR:
cya01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
CYA_2218 (pnpA)
Messenger RNA biogenesis [BR:
cya03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CYA_2218 (pnpA)
Transfer RNA biogenesis [BR:
cya03016
]
Prokaryotic type
tRNA degradation factors
CYA_2218 (pnpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
KhpA-B_KH
KH_2
S4
GTP_EFTU_D2
EntA_Immun
Motif
Other DBs
NCBI-ProteinID:
ABD00357
CyanoBase:
CYA_2218
UniProt:
Q2JQF4
LinkDB
All DBs
Position
complement(2233250..2235388)
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AA seq
712 aa
AA seq
DB search
MAEYTRSISFYGREIDINIGLMAPQAGCGVWLTSGETSVLVTATRQAGRAGVDFLPLLVD
YEERLYAAGRIPGGYLRREGRPPERATLISRLIDRPLRPLFPEWLRDDVQIVATTLSVDD
KVPPDVLCILGASLAIHSARIPFNGPVAAVRVGLVKDEFIINPTYAEIEAGDLDLVVAGC
ADGVIMVEAGANQLPEKDVVEAIEFGFEAVQELLKAQQQVFADLNITPVELPPPPQNEEL
VAFVAEHAQEEIRSVLRQFLDKTSREQQLEAIKAKLEAQIQARPEGDPLRLYLLENPKEL
DNQFKALTKKLMRQQILQEGVRVDGRKLDEVRPVSCRVGLIPRVHGSALFNRGLTQVLSI
TTLGTPGDAQELDDLHPVDEKRYMHHYNFPGFSVGEVRPSRSPGRREIGHGALAERALVP
VLPKEEEFPYVVRVVSEVLSSNGSTSMASVCGSTLSLMDAGVPIKAPVSGVAMGLIKEGD
EVRILTDIQGIEDFLGDMDFKVAGTRAGITALQMDMKITGITVDVVEKALLQAKAGRDYI
LDKMLEVLPAPRPQLAKTAPRLLTFKVDPEDIGKIIGPGGKMVRSITEATGAKVDISDDG
TITVSSSVGGQAEAARAMIENLVRRVEEGQVYLGKVTRIIPIGAFVEFLPGKEGMIHISQ
LAEYRVSRVEDEIAVADEVVVKVRSIDHKGRVNLTRLGISPEEAARVRNHHP
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atggcggaatatactcggtcgatttccttttacgggcgggaaattgacatcaatattggg
ttgatggctccccaggcaggttgcggagtctggttgacttctggggaaacttcggtcttg
gtcacggctacgcgacaagccggtcgtgccggtgtcgatttcttgcctttgctggtggac
tatgaggagcggctctacgctgccgggcggatcccaggaggctacttgcggcgggaaggt
cggccaccggagcgggccaccctgatctctcgtcttatagaccggcccctgcggcctttg
ttcccagaatggctgcgggacgatgtgcaaatcgtggccaccaccctctcggtggacgac
aaggtgccgcccgatgtgttgtgtattttgggggcctcgctggccatccacagcgctcgc
atccccttcaacggcccggtggcggcggtgcgggtcggcttggttaaagatgagttcatc
atcaaccccacctatgccgagatcgaggccggcgatctggatttggtggtggctggctgt
gccgacggcgtaatcatggtggaggccggcgccaaccaactgccggaaaaggacgtggtc
gaggccattgagtttggtttcgaggccgttcaagagctgctcaaggcccaacagcaagtt
ttcgccgatctcaacatcacccctgtggagctgcccccgccccctcaaaatgaggagctg
gttgcctttgtggcagaacacgcccaggaggagattcgctccgtcctcaggcagttcctg
gataagaccagccgcgagcaacaactggaggcgatcaaggccaagctagaggcccagatc
caggcacggccagagggggatcccttgcggctgtatctgctggaaaatcccaaggaattg
gacaaccagttcaaggctttgaccaagaagctgatgcgccagcagatcttgcaggagggg
gtgcgggtggatgggcgcaagctggacgaggtgcgaccagtctcttgtcgggtgggcttg
atcccacgggtacacggcagcgctctgttcaaccgcggcctcacccaagtcctttccatc
accaccctcggcacccctggtgatgcccaggagctggacgatctgcacccagtggacgag
aagcgttacatgcaccactataacttccccggcttttccgtgggagaagtgcggccctcg
cgctcgccgggacggcgggagatcggccatggggcgctggcggagcgggccttggtgccg
gtgctgcccaaggaggaggagtttccctacgtggtgcgggtggtctcagaggtgctctcc
tccaatggctccacctcgatggcctcagtctgtggctctaccctgtctttgatggatgcc
ggggtgccgatcaaagcgccggtcagcggcgtagccatgggcttaattaaggaaggggac
gaggtgcgcatcctcaccgacatccagggcatcgaggactttttgggggatatggacttc
aaggtggccggcacgcgggccgggatcaccgctttgcagatggacatgaaaattaccggc
atcaccgtggatgtggtggagaaagccctcctgcaggccaaggccgggcgggactacatc
cttgacaaaatgctggaggttctcccggcgcctcggccccagttggccaaaacagcccct
cgtctgctcacgttcaaggtggatccggaagatatcggcaagatcatcggccctggcggc
aagatggtgcgcagcatcaccgaagcgacaggagccaaggtggacatcagcgacgatggc
acgatcaccgtgtcctcctcggtgggcggccaggcagaagcggctcgggcgatgatcgaa
aacctggtgcggcgggtggaagaggggcaggtgtacctgggcaaggtgacccgcatcatt
cctatcggcgcctttgtggagttcttgccgggcaaagagggcatgatccacatctcgcaa
ctggcggagtaccgcgtcagcagggtggaggatgaaattgccgtagcagatgaggtggtg
gtcaaggtgcgcagcatcgaccacaagggccgcgttaacctcacccgtctcggcattagt
cctgaggaggcggcgcgggtgcgcaaccatcacccctga
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