Synechococcus sp. JA-3-3Ab: CYA_2519
Help
Entry
CYA_2519 CDS
T00318
Name
(GenBank) RecF/RecN/SMC N terminal domain protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
cya
Synechococcus sp. JA-3-3Ab
Brite
KEGG Orthology (KO) [BR:
cya00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cya03400
]
CYA_2519
DNA repair and recombination proteins [BR:
cya03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CYA_2519
Archaeal homologous recombinant proteins
CYA_2519
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_15
AAA_21
SbcC_Walker_B
AAA_29
Prefoldin_2
LppA
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
ABD00639
UniProt:
Q2JRV2
LinkDB
All DBs
Position
complement(2531669..2535265)
Genome browser
AA seq
1198 aa
AA seq
DB search
MRILSLALQNFKSHEDAFFEFEPGINAICGENGAGKTSILEAIAWVLFDYCPYNQEELIR
TGASDAVATVQFISQWDQRTYDVRRSVRQGYRLFDPQLKQRLDYERKADVLAWLRQHLGV
PAGTDLARLFATTIGVPQGTFTADFLKTSRERKEVFDRILKVEEYQQVAKDLLAVEKYSE
AQVLAVKHQIELLHQQMQDWDPLQVEQQRIEQELSHWQERLSHHTHTLAEVKLELERLEK
LLEQIQTLDRQIAQLEQEGSLLAVALEQAEKLWAEAQRAQAQQQHHQEGSQRFLAIEDRL
RELEKQRQQRLEWLKRREALLSQKQNLENQLARLQEKLSQQQRCKQELEELAPQIQAQEE
LERRQSHWAQQLDTLLQLHREWEQLQGEWSAHAGRCQLLQSRVQEAEQAQAICQQHESAY
RRYLELEAWVAEQEALRRTRQTLTAQRETLRQQLHQLQLRESEYRQQLQLFQKIEEEKLH
LQTLCEKQTVLEQRYSQIGQKLASFQALRLELRQRETEQEQGRAQLEQLRLQLRQRQADR
EHVAKIPLLEAQQERLQTQLSRLAAARQFQRELQALFEQGSHQLAQHNRSIQTLVEELAA
CQQSYPQLQPLWQRIPQVLAQSSALSQQLLQSIQQILQDLSPQTCEPQLRQQLADIQEQL
KTLQPLLGLTAQIPELEAQIQQLLQWQNERQSKIEDLQWSLEAEPDFLRQQQEIGQALQA
LGDPRGQIQRLEKELNNKPRVEQEYQQVVASIQQLQQQIQALEQQLQPLADLDERIAALR
EEQSCHRNSYETVIRMQPLVQSLPQRKDELQTAQLALEQIQQAKQEKQAQIDRWEKIEGS
KDYLQAQIVKAAETLKSLGDPRSRAEWLKAELKLERQYLQTQAGCLQQIQDLEAALRPLE
EALLQTEHLDRELGSLQEQREHYRADHEQYLGLEPIAKLLPQRERKLSELKAQQQALQTQ
LSQLRAQRDPLASLYQPQEHQRLRSLLQATEIQKAEAQARLESLAPQLQKIQERLQQLER
VRETLKQVETQRIEKERLHRFIKFSRDTYKKAGPQITQYYLQQINNIADHLFREILNRPN
VALTWEADYEIRVQEGGGPKRRFASLSGGEQMSAALAVRLALLKVLGQLDIAFFDEPTTN
MDAQRRQRLAESITNLRSFEQLFVISHDDTFEQVTENIIRVERHAGSGQMRRDPTYGI
NT seq
3597 nt
NT seq
+upstream
nt +downstream
nt
atgcggatcctctctttggctctgcagaacttcaagtctcatgaggacgccttcttcgag
tttgagcccggtatcaacgccatttgtggagaaaatggagcaggcaaaaccagcattcta
gaggccatcgcctgggttttgtttgactactgcccctacaaccaagaagaactcatccgc
acaggggccagcgatgcggtggctactgtccagtttatctcccagtgggatcagcgcacc
tacgacgttcgccgcagtgtcaggcagggatatcgcctcttcgatccgcaattgaagcag
cgcctagattacgagcgcaaggcagatgtgctagcgtggctgaggcaacatttgggtgtg
cccgccggtactgatttggcgcggctctttgctacaacgattggggtgccccagggcact
ttcacagcagattttctcaaaaccagtcgggagcggaaagaagttttcgaccgcatcttg
aaggtagaagagtaccagcaagttgcaaaggatctgctggcagttgaaaaatacagcgag
gcgcaagttctggccgtcaagcatcaaattgagctgctccatcaacagatgcaagactgg
gatccgctgcaagtagagcagcagagaatcgagcaagaactgagccactggcaggagcgc
ttaagccaccatacccataccttggccgaggtgaagctggagctggagcggctggagaag
ctgcttgagcaaatccaaacgctcgaccggcaaattgctcaactggagcaagagggatcc
ctgctggcagtagcccttgagcaagccgaaaagctgtgggcagaggcccagcgagcgcag
gcacaacaacagcaccaccaagagggatctcagcgctttttggccatagaagatcggttg
cgggagctggaaaagcaacggcagcagcgcctggagtggctgaagcggcgggaggccctg
ctctcgcaaaagcagaacctcgaaaaccaactggcgaggctgcaggaaaaactcagccaa
caacagcgctgcaagcaggagctagaggagctggctccccaaattcaagcccaagaggag
ctagagcgccggcaaagccattgggctcagcagctcgacaccttgctccaactgcaccgc
gaatgggagcagcttcagggagaatggtcagcccacgccgggcgctgtcaactgctgcaa
agccgcgtccaagaggctgaacaggcgcaggccatctgtcaacagcacgaatcggcctac
aggcgttatctggagttggaggcttgggtggcagagcaagaggcgttgcgacgaacacgg
cagaccttgacagctcagcgggaaactttacggcagcagctccaccaactccaactgcga
gaatctgagtatcgacagcagctccaactcttccagaaaatcgaggaggaaaagctacac
ctgcaaacgctctgcgaaaagcaaaccgtcctggaacaacggtactctcaaattggccag
aagttggcctcttttcaggccctgcgcctagagctaagacagagagaaacagaacaggaa
cagggccgggcccagttggaacagttgcggctgcagcttcgacagcgacaggccgatcga
gagcacgtagccaagattcccctcctggaggctcaacaagagcgactgcaaactcagctc
agccgcctagccgcggcgcggcaatttcagcgggaactccaagcccttttcgagcagggc
tctcaccaactggcccagcacaaccgcagcattcaaactcttgtggaggagctggccgct
tgccaacagagttatccgcaactccaacctctatggcagcggatcccgcaagttctggcc
cagtcttcagccctcagccaacagttactgcaatccatccaacaaatcctacaggatctt
tccccccaaacttgcgagcctcagctacgccagcaactggctgatatccaggagcaactc
aagactttgcagcccctgctgggcttaacggcgcagattcccgagttagaagctcaaatt
caacagttgctgcaatggcaaaacgaacgccagagcaaaattgaggatcttcagtggagc
ctcgaggcagagccagactttcttcggcaacaacaggaaattggccaagcgctgcaggca
ctgggggatcccagggggcaaatccagcgcctggaaaaggagctcaacaataagccgaga
gttgagcaagagtaccagcaagttgtagccagcatccagcaacttcaacaacagatacaa
gccctagagcagcagcttcagccccttgccgatctagacgagagaattgccgctttacgg
gaggagcagagttgccatcgcaacagctatgaaaccgttatccgtatgcaaccacttgtc
caaagtttgccacaacgaaaagatgaactgcaaacagctcagttggctctagaacagatc
cagcaagctaagcaggaaaaacaagcccaaattgatcgctgggagaaaatagagggatcc
aaagattacctgcaagcccaaattgtaaaagccgccgaaaccttgaagtccctgggggat
ccgagaagccgggctgagtggctgaaagcggagctcaagctggaaagacagtacctgcaa
acgcaggcaggttgcctacagcaaatccaggatttggaggcagcactccgccccctcgag
gaagcgctgctgcaaaccgaacacctggatcgagagctgggatccctgcaagaacagcgc
gaacactaccgagcggatcacgagcaatatctaggtctggagcctattgccaaactgctc
ccccaacgagaacggaagctcagtgaactgaaggcgcaacagcaagcattgcaaacccaa
ctgtcccaattgcgggcacagcgggatcctttggcttccctctatcagcctcaggagcac
caacgtctgcgctcccttttgcaggccaccgaaattcaaaaggccgaggctcaagctcgc
ctggaaagccttgcccctcaactacagaaaatccaggaaaggttacagcaactggagcgg
gtgagagaaaccttaaaacaagtcgagacgcaacgaatcgagaaagagcgtctgcatcgc
ttcattaagtttagccgagatacctacaaaaaggctggccctcaaattacccaatactat
ctacagcagatcaacaacattgccgatcacctcttccgggaaatcctcaaccgccccaat
gttgccctcacctgggaggccgactacgagatccgcgttcaagagggaggcggccccaaa
cgacgttttgccagcctttctggaggagagcagatgtcggcagctctggcagttcgccta
gccttgctcaaggtgttaggacagttggatattgccttcttcgacgagcccaccaccaac
atggacgcccagcgccgacagcgattggccgagtccattaccaatttgcgctcttttgag
cagctatttgtgatcagccacgacgatacctttgagcaagtaacggagaacatcattcgg
gtggagaggcacgctggctctggccagatgaggagggatcccacctatggtatttag
DBGET
integrated database retrieval system
