Synechococcus sp. JA-2-3B'a(2-13): CYB_0169
Help
Entry
CYB_0169 CDS
T00319
Name
(GenBank) polysaccharide deacetylase family protein
KO
K11931
poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase [EC:3.5.1.-]
Organism
cyb
Synechococcus sp. JA-2-3B'a(2-13)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Polysacc_deac_1
NAGPA
Glyco_hydro_57
Motif
Other DBs
NCBI-ProteinID:
ABD01170
UniProt:
Q2JPV6
LinkDB
All DBs
Position
complement(180951..183122)
Genome browser
AA seq
723 aa
AA seq
DB search
MILLGFGTGALVAWATAHPDWVSRLPGLSPPLAEIPAPRAHAKAAQQRLPISLETQLERD
PFALDPLASLSYVPAIMYHDVVAGRKQVWFDTTAAELRQHFEAIKQAGLTPIHIDQLYKH
LRDGDPLPEKAILLTFDDAYLGLYENAYPLLKEYNYPATYFVQTGFVGVPTSKDHFTWDQ
MREMDASGLIDFAAHTVNHPPDLRVLDDARLRREVFDCKAKLEQELGHPIHYFAYPEGNR
DERVKQYLADAGYRMSFTMDPGFTGQSPNLLEVRRFNQFRITEAIIGARTFSLNRSPDYR
LDVTQPLALTDEVINQVRVLTLRGGRAATVHAERRYEVSTLAQRYQADAGINGSFFSIPW
INSASNVMVGPAMAANHKTFIPGRPEDDQAIRGRPLVLLGRDRLRFVPFDPDTMTHLENI
RQLMPDVTDLFVAGLWLVKDGHALSPAEINSFRLASAAEFRPRAFFGVDDQERVVIGVTK
THVNAAILASLLPKTGIREAVLLDSGFSTSLVYQGEILATGHAGPNQPSRPVPHAILLYD
LTRLWREDPHPEAKAGSEGDQLEGLVQLLPASDQDAAKAQLESVLASQRTLRRGDRGAAV
VAVQLGLSHLATQQGRLDLLPSGPDGVYGQELAQAMAELVLAAPERSEMGSPLPATPTPL
VAGTATARQGVDIIDAQLLRRLLERVNLASPSVLVDTRLERPALSLERKPTRKLLPRVAF
GQD
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
gtgatcctgctggggtttgggactggagccctggtagcctgggcaactgctcatcccgat
tgggtcagccgcctgccggggctctcgccacctctagcggagatccctgccccccgcgcc
cacgctaaagcggctcaacagcgcttgcccatctccttagagacccaactggaacgggat
ccctttgctttggatcccttggccagcctttcttatgtgcccgccatcatgtatcacgat
gtggtggctggccgcaagcaggtctggttcgacactacggcggcggagctgcggcaacac
tttgaggccattaagcaggcggggttgacccccatccacatcgaccaactgtacaaacac
ctgcgggacggggatcccttgcccgaaaaagccattttgctcacttttgacgacgcctac
ctgggcctgtacgagaacgcctacccccttttgaaggagtacaactaccccgccacctac
tttgtgcaaaccggctttgtcggcgtgcccaccagcaaggatcacttcacctgggatcag
atgcgggagatggatgccagcgggctgatcgactttgccgcccataccgtcaaccatcct
cctgacctgcgggtgctagacgatgcccgtctgcggcgagaggtgtttgactgcaaggcc
aagttggagcaggagctgggccaccccatccactactttgcctatcccgaaggcaaccgg
gacgagcgggtgaagcaatacctggccgatgccggttaccggatgtcttttacgatggat
cccggttttacaggacaatcgcccaacttgctggaggtgcgacgctttaaccagtttcgc
atcaccgaggccatcattggcgcccgcacctttagcctcaaccgcagccccgactaccgg
ctggatgtgacccaaccgttggccttgaccgacgaagtgatcaaccaggtgcgtgttctc
acccttcgcggcgggcgggcggctacggtgcatgcggagcggcgctacgaggtcagcacc
ctggcccagcgctaccaggccgatgccggcatcaatggcagctttttctccatcccttgg
atcaactctgccagcaatgtcatggtggggccggcgatggctgccaaccacaagaccttc
atccccggtcgtcccgaagatgaccaggcaatccgcggccggccgctggtgctgctgggc
agggatcgcctccgctttgtgccctttgatcccgacaccatgacccacttggagaacatc
cgccagttgatgccggatgtcacggatctgtttgtggccggtctgtggctggttaaggat
ggccatgccctctctccggcggagatcaactcgttccgccttgccagcgctgctgagttt
cgccccagagctttctttggggtagatgaccaggagcgggtggtgatcggagttaccaaa
acccacgtcaacgccgccatcctggccagtctgctgcccaaaaccgggatccgggaagcc
gtgctgctggactctggctttagcacctccctggtctaccaaggggagatcctcgccacc
ggccatgccggtcccaaccagcccagccgtcctgtgccccatgccatcttgctctacgac
ctgactcgcctttggcgggaggatccccatcccgaggccaaggctggctctgagggagat
cagctggaagggctagtgcaacttttgccagctagcgaccaagatgcagccaaagcccag
ctagagagcgtcttggccagccaacgcactttgaggcggggggatcggggggcggcggtg
gtggcggtgcaactggggttgagccacctggccactcagcagggacggctggatctactc
ccttcgggccctgatggggtgtatggtcaagagctggcccaggcaatggcggaattggtg
ctggctgcacctgagcgcagtgagatgggatccccccttccagccacccctacccccctg
gtggccggaacggcgacagcccgccaaggggtggacatcatcgatgctcaactgctgcgg
cgtctgctggagcgcgttaacttggcctctccctcggtactggtggatacgcgcttggaa
cggcctgccctgtccctggagcgcaagccaacccggaaactgctgcccagggttgccttc
gggcaggactaa
DBGET
integrated database retrieval system
