Synechococcus sp. JA-2-3B'a(2-13): CYB_0202
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Entry
CYB_0202 CDS
T00319
Symbol
phrB-1
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
cyb
Synechococcus sp. JA-2-3B'a(2-13)
Brite
KEGG Orthology (KO) [BR:
cyb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cyb03400
]
CYB_0202 (phrB-1)
Enzymes [BR:
cyb01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
CYB_0202 (phrB-1)
DNA repair and recombination proteins [BR:
cyb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
CYB_0202 (phrB-1)
Prokaryotic type
CYB_0202 (phrB-1)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
ABD01202
UniProt:
Q2JPS4
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All DBs
Position
212976..214439
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AA seq
487 aa
AA seq
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MTSPVLLWHRRDLRLGDNTALHEAAQRSSQVVPVFIFDPQMLRRSDMAPARVAFLLQALQ
ELQERYAQMGIPLIWRLGDPSVELRCLAIDLGARAVFWNADGEPFALQQESRVQASLAAA
GIQSFSYQDMLLHGPGEVLTQAGEPYSVFTPFWRRWASLPKPDPYPIPKGLQPVSGLKAQ
PLPTLADLGFVCDQRIPAAGEAAAQALLEDFCQGLRILDYERARNFPAEPGTSLLSPHLC
WGTIGIRQVWQATREVEAEVRSQEAESSLQTWRQELCWREFYKHVLAHWPHVETGAYRRA
FDALEWDNRQDWFQAWCTGQTGYPIVDAAMRQLNETGWMHNRCRMIVASFLTKDLLIDWR
WGERYFMQKLVDGDLAANNGGWQWSASVGTDPKPLRIFNPATQAARYDPEGEYIRRYLPE
LARLDTPALLWVGDDPKGAWALRERRSCGYPDPIVDHKVQQQAFKRRYQAVQQAYSRSVR
DGLPPPS
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgacttcccccgttttgctttggcatcgtcgcgatctgcggttaggggacaacacagcc
ctgcatgaggcagcccagcgcagctcccaggtggtgcctgtcttcattttcgacccgcag
atgctgagacggtcggacatggccccagctagggtggcctttttgcttcaggctttgcaa
gagctccaagagcgctacgcccagatggggatcccactgatctggcggctgggggatccc
tcggtggagttgcggtgcttggccatagacctgggagccagggccgtgttttggaatgcc
gatggggagccgttcgccctacagcaagagagtcgagtgcaggccagtttggccgcagcc
gggatccagtccttctcctaccaagacatgctgctgcacgggccgggggaagtgttgacc
caggcgggggagccctattcggtcttcactcccttctggcgcaggtgggcgagcttgccc
aagccggatccctacccgattcccaaagggctacaaccggtgtccggtctgaaggcgcag
cctctgcccactttggcagatttgggctttgtctgcgaccagcggatcccagcagcgggg
gaagcagcagctcaggcccttttggaagacttttgtcagggtttgcgcattttggactac
gagcgagcccgcaacttcccggctgagccgggcacttctctactgagcccccacttgtgc
tggggaacgatcggcattcgccaggtgtggcaagccacgcgggaggtggaagccgaggtg
cgcagccaagaggccgaaagcagcttgcaaacttggcggcaggagctgtgctggcgagag
ttttacaagcatgtcttggcccactggccccacgtggaaaccggagcctatcgacgagcc
ttcgacgccctggagtgggacaatcggcaggactggtttcaggcctggtgcaccggtcag
acgggctaccccatcgtggatgcggccatgcgccaactgaacgaaactggctggatgcac
aaccgctgccgcatgattgtggccagcttcctgaccaaggatctgcttatcgattggcgc
tggggggaacgctactttatgcaaaagctggtggatggggatctggcggccaataacggc
ggttggcagtggagcgccagtgtgggcacggatcccaagcccctgcgcattttcaacccg
gccacgcaagcagcccgctatgacccggaaggagagtacatccgtcgctatctgccggag
ctggcacggctggatacgccggctctgctgtgggtgggagatgaccccaagggagcctgg
gctttgcgggaacggcgaagttgtggctatccggatcccattgtggatcacaaggtgcag
cagcaggcgttcaaacggcgctaccaggcggtgcagcaggcctactctaggtctgttcga
gacggtctcccccctccttcctag
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