Synechococcus sp. JA-2-3B'a(2-13): CYB_0500
Help
Entry
CYB_0500 CDS
T00319
Symbol
rumA
Name
(GenBank) 23S rRNA (uracil-5-)-methyltransferase RumA
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
cyb
Synechococcus sp. JA-2-3B'a(2-13)
Brite
KEGG Orthology (KO) [BR:
cyb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cyb03009
]
CYB_0500 (rumA)
Enzymes [BR:
cyb01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
CYB_0500 (rumA)
Ribosome biogenesis [BR:
cyb03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
CYB_0500 (rumA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRAM
Methyltransf_31
Methyltransf_25
Cons_hypoth95
MTS
Methyltransf_11
Methyltransf_15
PrmA
RrnaAD
TRM5-TYW2_MTfase
DOT1
PCMT
Methyltransf_23
Motif
Other DBs
NCBI-ProteinID:
ABD01493
UniProt:
Q2JP08
LinkDB
All DBs
Position
511015..512409
Genome browser
AA seq
464 aa
AA seq
DB search
MEHPIPSGLPDPVKPGDLLALEVTALTPQGDGIAHTVGLGQGRVVFVSQAVPGDQVVAQI
TEIKRNYLVGRIRSLISPSPQRVRPACIVADKCGGCQWQHVSYAQQLATKQQILRDALER
IGGLTLPQPVPILGSQQPLRYRNKVTYPMAKPEGQPLRMGYYQRGSHRLVNLNQCPVQDE
RLDVFLREIKRDLQETGWSVYDESRHQGHLRHLGLRIGRRTREVLLTLVSCSRRLPHLES
WAERWMQRYPDLVGVCLNLNSARTNAIFGPETEVIAGRGSLREEFAGFSLWIDSTSFFQV
NTEQAEAFFTWIADQLNLRGEETILDAYCGIGTLTLLLAQRAKRAMGVEALPEAVAQARY
NAQFNGIASAQFFQGTVEQVLPTLPPADIVVLDPPRRGCDRQVLETLKLRRPPRIVYISC
HPATLARDLQILLAEGSYRLTQWRAADFFPQTGHVEGVAFLERV
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atggaacatccgatcccttccggccttcctgatcccgttaaacctggggatctcttggcg
ttggaggtcacggccctgaccccccagggagatggcattgcccacacggtaggacttgga
caagggcgagtggtgtttgtgtcccaggcggtgcccggggatcaggtggtggcccaaata
accgagatcaagcgcaactacttggtcgggcgaattcggtcgctgatttctccctctccc
caacgggtgcgaccagcctgcattgtggcggacaaatgtggtggctgccaatggcaacat
gtcagctatgcccagcaattggccaccaagcagcaaatcctcagggatgcactggagcgg
attggcggtctgactctgccgcagcctgtccctattttgggatcccagcagccgctgcgc
tatcgcaacaaggtcacctaccccatggccaaaccggagggccagcccttgcgcatgggc
tactaccaacggggcagccaccgcctggtgaacctcaaccaatgccccgtgcaagacgag
cggctggatgtgttcctgagggaaatcaagcgcgatcttcaagagacgggctggagtgtg
tatgacgaaagtcgtcaccaaggtcatctccgccacttgggtttgcgcatcggtcgccgc
acccgcgaggtgcttcttaccttggtcagttgcagtcgtcgcctgccccatctggaaagc
tgggccgaacgctggatgcagcgctaccccgacctggtgggggtctgtctcaatctcaac
tcggcccgcaccaatgccatcttcggcccggagactgaggtgattgccggtcgggggtct
ttgcgggaggaatttgccggtttttccctctggatcgacagcacctctttcttccaggtc
aacacagagcaagcagaagccttttttacctggatagccgaccaactgaacctgcgggga
gaggaaaccatcctggatgcctactgtggcatcggcaccttaaccttgctgctggcgcaa
cgggcgaaacgggcgatgggggtggaagctttgccggaagcggtggcccaagcccgctac
aatgcccagttcaacggtatcgcctcagcccaatttttccagggcacggtggaacaggtt
ttgccgaccctgccccctgccgacattgtggtgctggatccgccgcggcgcggctgcgac
cgccaagtgctcgagaccctaaagctgcgacgaccaccacgcatcgtctacattagctgt
caccctgccactttggcgcgagacttgcagatcctactggcagagggatcctatcgcctt
acccaatggcgggcggctgacttctttccccaaaccgggcatgtggagggggtggccttt
ttggagcgagtttga
DBGET
integrated database retrieval system
