Synechococcus sp. JA-2-3B'a(2-13): CYB_0669
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Entry
CYB_0669 CDS
T00319
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
cyb
Synechococcus sp. JA-2-3B'a(2-13)
Pathway
cyb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cyb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CYB_0669 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cyb03019
]
CYB_0669 (recQ)
03400 DNA repair and recombination proteins [BR:
cyb03400
]
CYB_0669 (recQ)
Enzymes [BR:
cyb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CYB_0669 (recQ)
Messenger RNA biogenesis [BR:
cyb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CYB_0669 (recQ)
DNA repair and recombination proteins [BR:
cyb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CYB_0669 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
Motif
Other DBs
NCBI-ProteinID:
ABD01654
UniProt:
Q2JNK5
LinkDB
All DBs
Position
complement(683073..684488)
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AA seq
471 aa
AA seq
DB search
MQDWQQIQQALKQHWGYETLRPPQDQVIRALLDKRDALVVLPTGFGKSLCFQLAALLQRG
VMLVVSPLIALMEDQVQDLWKRKLPAACLHSELDPALRKRVLKALEENRLRLLYLGPETL
FSPPVWQRLQQPQVHINGLIVDEAHTLVHWGGSFRPDYRRLGLLRPALAPVKSSFPIAAF
TATADPQTCSRLSQILELRDPEHIRADPLRANLSLNVAIAWSPADRRRRLLRFLGENPGS
GLVYVRTRRDGEELAEWLGRQNLKTATYHGGLEAGSRRRLERAWLQGELRFLVCTNAFGM
GINKPDVRWVLHFHPPPSLMDYLQEVGRGGRDGGPCRALMLVSEPTGMLDPSDRRRQAYF
YSQQERLQARARHLLQTLPQQGSYADLPPGEVRVALGLLQEMGCLHWPDPFHFQVLHRRW
QPLRREDPWQGMEALIHARGCRWQAILPYFGYPGEQPGLPCGTCDRCRLSR
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
ttgcaggattggcagcaaatccaacaggccctcaagcaacactggggttacgagacgctg
cgcccaccccaggatcaggtgatccgcgctctgctggacaagcgcgacgcgctggtggtg
ttgccgacggggtttggcaaatccctgtgctttcagctagcagctctgctgcaaaggggg
gtgatgctggtggtttcacccctaatcgccctcatggaagaccaagttcaggatctttgg
aaacgcaagctgccggcagcctgtctccacagcgaactggatccggccctgcgcaagcgg
gtgttgaaggcccttgaggaaaaccgactgcgcctgctctatttggggccggagacccta
ttcagcccccccgtttggcaacggctgcaacagcctcaggtgcacatcaacggcctgatc
gtggatgaggcccatacgttggtgcattgggggggatccttccggcccgactaccgccgt
ctgggattgctgcgcccggctctggccccggtgaagtcctcctttcccattgccgctttt
accgccacggctgacccccaaacctgcagccgcctcagccaaatcctagagctgcgggat
ccggagcacattcgcgccgatcccctgcgggccaacctctccctcaatgtggcgatagcc
tggagcccggcggatcgccgtcgtcgtctgctgcgattcctgggcgagaatcccgggtcg
ggtctggtctatgtgcgcacccgacgggatggggaagagctggccgagtggctgggccga
cagaacttgaaaaccgccacctaccatgggggactggaagcgggatcccgccgtcggctg
gaacgggcctggctgcagggggaactgcgctttctggtctgcaccaacgcctttggcatg
ggcatcaacaagccggacgtgcgttgggtactgcactttcatcccccgcccagcttgatg
gattatttgcaagaggtggggcgaggtggtcgggatggtggcccttgtcgggccctgatg
ctggtctcggagccgacgggcatgctggatcccagcgatcgccggcgccaagcctatttc
tattcccagcaggagcgccttcaggcccgagcacgccacctgctccaaaccctaccccag
cagggatcctacgccgacctgccgcctggagaggtacgggtggccctgggtctattgcag
gagatgggctgcctgcactggccggatccctttcactttcaggtgttacaccgccgttgg
cagcctttaagacgagaggatccctggcaagggatggaagccctcatccacgcccgcggc
tgtcggtggcaggcgatcttgccctattttggctaccctggggagcagcccggcctgccc
tgtggcacctgtgaccgttgtcggctttctcgttag
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