Synechococcus sp. JA-2-3B'a(2-13): CYB_1361
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Entry
CYB_1361 CDS
T00319
Name
(GenBank) 3'-5' exonuclease family protein
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
cyb
Synechococcus sp. JA-2-3B'a(2-13)
Brite
KEGG Orthology (KO) [BR:
cyb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cyb03016
]
CYB_1361
Enzymes [BR:
cyb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
CYB_1361
Transfer RNA biogenesis [BR:
cyb03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
CYB_1361
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GFIT
Motif
Pfam:
DNA_pol_A_exo1
BE_C
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
ABD02334
UniProt:
Q2JLS0
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All DBs
Position
complement(1432669..1433301)
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AA seq
210 aa
AA seq
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MGLQPFQLCDEDLTPAVAKALAREPYLAVDTETMGLIPQRDRLCVVQIANSAGEVVLLRL
SRGVKQAPFLAQLLMAPSIEKIFHYARFDLAMLRYHLGIRAWPVFCTKIASKLARTYTSK
HGLKDVVSELCGVELNKTAQSSDWGAVHALSAEQLEYAANDVRYLIPVRHKLAEMLRREE
RWELAQQCFQHLPTLVELDLLGFSNVFEHQ
NT seq
633 nt
NT seq
+upstream
nt +downstream
nt
gtgggcctgcaacctttccagctctgcgacgaagatctcacccctgcagtggcaaaggcc
ctggccagggaaccttacctggccgtggatacagaaacaatggggctgatcccgcagcgg
gacaggctttgcgtggtgcaaatcgccaactccgccggtgaggtggtgctgttgcggctg
agccgcggggtaaagcaggccccctttttggcgcagctgctgatggctccaagcattgag
aagatcttccactacgcccgctttgacctggccatgctgcgctatcacctggggatccgg
gcgtggcccgtcttttgcaccaaaattgccagcaaactggcccgcacctacaccagcaag
catggcctcaaggatgtggtgagcgagctgtgcggggtcgaactcaacaaaactgcccaa
agctccgattggggagccgtccacgcgctatccgccgaacagctggaatatgccgccaac
gatgttcgctatttgatcccggtgcgccacaagttggcggagatgttacggcgggaagaa
cgctgggagttggcgcagcagtgtttccaacatttgcctactttggtagagctggatctg
ttgggcttcagtaacgtcttcgaacatcagtag
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