Synechococcus sp. JA-2-3B'a(2-13): CYB_1371
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Entry
CYB_1371 CDS
T00319
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
cyb
Synechococcus sp. JA-2-3B'a(2-13)
Pathway
cyb00300
Lysine biosynthesis
cyb00470
D-Amino acid metabolism
cyb01100
Metabolic pathways
cyb01110
Biosynthesis of secondary metabolites
cyb01120
Microbial metabolism in diverse environments
cyb01230
Biosynthesis of amino acids
Module
cyb_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
cyb00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
CYB_1371 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
CYB_1371 (dapF)
Enzymes [BR:
cyb01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
CYB_1371 (dapF)
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Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Pro_racemase
Motif
Other DBs
NCBI-ProteinID:
ABD02344
UniProt:
Q2JLR0
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Position
complement(1441288..1442145)
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AA seq
285 aa
AA seq
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MTPRLSFHKYQGLGNDFILVDNRWQSQPCLSPEEAVALCNRRFGVGADGVIFLLPGQEGA
DFSMRLFNSDGSEAEMCGNGIRCLARFLQDLGIPGRDGAYQIHTLAGRIVPQVRADGLVT
VDMGIPRLLAKQIPTTLVEPDEKVIRQPLAVAGREWRVTAVSMGNPHCVVFLEEEGSLEE
LDLAAVGPLFEHHPAFPERTNTEFVQVLSPTRLRLRVWERGAGATLACGTGACAVLVAAV
LEERAESQATVELPGGNLEIRWDPSTQHVWMTGPALHVFSGTTAG
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
ttgaccccccgtctctcctttcacaagtaccaggggttggggaacgattttatcttggtg
gacaaccgctggcagtctcaaccctgcttgagcccggaagaggccgtcgccctttgcaat
cgccgctttggggtaggagccgatggggttatcttcctgctgccggggcaggagggggca
gatttcagcatgcgcctcttcaacagcgacggttccgaggcggagatgtgcggcaatggg
atccgctgtttggcccgctttctgcaggacttggggatcccaggtcgggatggcgcctac
cagatccacaccttggcggggcgaatcgtgccgcaggtgcgggcagatgggctggtcaca
gtggacatggggatccctcgccttttggccaagcagatccccaccaccctggtcgaaccg
gatgagaaggtcattcggcagccgcttgcagtggccgggcgagagtggcgggtgacggcg
gtgagcatgggcaatcctcattgtgtggtcttcctggaagaagagggatccctggaggag
ctggacttggcagctgtgggccccctgtttgagcatcatccggcctttcctgagcgcacc
aacaccgaatttgtgcaggtgctcagcccgactcgtctgcgcctacgggtttgggagcgg
ggagcaggggcaacgctggcttgtgggacgggtgcctgtgctgttttggtggctgctgtt
ttggaggagcgcgcagaatcgcaagctacagtagaactgccgggaggaaatctggaaatt
cgctgggatccgagcacacagcacgtgtggatgaccggccctgccctacacgtcttcagc
ggcaccactgccggttga
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