Synechococcus sp. JA-2-3B'a(2-13): CYB_1609
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Entry
CYB_1609 CDS
T00319
Symbol
gyrA
Name
(GenBank) DNA gyrase, A subunit
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
cyb
Synechococcus sp. JA-2-3B'a(2-13)
Brite
KEGG Orthology (KO) [BR:
cyb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cyb03032
]
CYB_1609 (gyrA)
03400 DNA repair and recombination proteins [BR:
cyb03400
]
CYB_1609 (gyrA)
Enzymes [BR:
cyb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
CYB_1609 (gyrA)
DNA replication proteins [BR:
cyb03032
]
Prokaryotic type
DNA Topoisomerases
CYB_1609 (gyrA)
DNA repair and recombination proteins [BR:
cyb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CYB_1609 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
ABD02571
UniProt:
Q2JL47
LinkDB
All DBs
Position
complement(1679987..1682515)
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AA seq
842 aa
AA seq
DB search
MSDNESTARIISTDLQREMSQSYLEYAMSVIVGRALPDARDGLKPVHRRILYAMHELGLT
ADRPFRKCARVVGDVIGKYHPHGDQAVYDALVRMAQDFSMRERLVDGHGNFGSVDNDPPA
AMRYTECRLTAFAQEALLQDIDANTVDFVGNYDGSQQEPLVLPARIPQLLLNGSSGIAVG
MATNIPPHNLSELVDGLIALIHNPNLTSLELMQWIPAPDFPTGALIMGQEGIREAYTTGR
SSITLRGVARVETIEQRGRPVRDAIIITELPYQTNKAAMIEKIAELVNEKKLEGIADIRD
ESDRSGMRVVIELKRDAQPQVVLNNLYKQTPLQANFGVNMLAILNGEPRTLTLRDALQAF
LDFREEVIERRTRYELQKAEERDHLLQGYLLALGQLDRVIALIRGAADTATAREELQAVL
GLSEAQADGILQMQLRRLTALEAEKIQAEHEDLVRQIADLRDILARRERVMQIISEELQQ
LKARFASPRRSRLCLEDGELGTDDLIENRETVIFLTEQGYIKRMGLEEFQVQGRATRGKA
GARIKEDDAIEQFFACRSHDTILFFTNRGVVYTLPAHQIPQGSRAARGSAIVQLLPITRE
ERVTSMVPVSQFSDDEYLVMLTRGGYIKKTALSAFANVRSNGLIAISLEENDELRWVRRA
RSSDDVVMATRQGMSIRFPADDEQLRPLGRATRGVRAITLNAGDDIVSMDIISAESVMAA
EREGEKLANPWVLVITKEGRGKRSAIDNFRQQNRGGKGVIATKFRQASDELAALRIVNAE
DEILLVTARGIVMRQLAKAIPTQSREATGVLVQRLDPEDSIVGVTVVPAALVAEEETSEA
SA
NT seq
2529 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacaacgaatcgacggcgcgcatcatctccaccgacctgcagcgggagatgtcg
cagtcctacctggaatacgccatgagcgtgatcgtcgggagggctttgccagatgcgcgg
gatggcctgaagccggtgcaccgccgcattctctacgctatgcacgagttgggcctgacg
gcggatcgccccttccgcaagtgtgcccgcgtggtgggggatgtgatcgggaaataccat
ccccatggggatcaggccgtctatgatgcgctggtgcgcatggcccaggatttctccatg
cgggagcgcctggtggatgggcatggcaacttcggctctgtggacaacgatccgccggcg
gccatgcgctacaccgagtgtcggctgactgcctttgcccaagaagccctgctgcaggat
atcgacgccaacactgtcgattttgtcggcaactacgacggatcccagcaagaacccctg
gtgctgccggcgcggatcccgcaactgctcctgaacggctcttccggcattgccgtgggc
atggccaccaacatcccgcctcacaacttgagcgaattggtggacggcctgatcgccctc
atccacaaccccaacctgaccagcctggagttgatgcagtggatcccggcccccgacttc
cccaccggggcgctgatcatgggccaggagggcatccgcgaagcctacaccaccgggcgc
agctccatcaccctgcggggggtggccagggtggagacgatcgagcagcggggccgaccg
gttcgagacgccatcattatcaccgagctgccctaccagaccaacaaggcagccatgatt
gagaagatcgccgagctggtcaacgagaaaaaactggaaggcattgccgacatccgcgac
gagagcgaccgcagcggcatgcgggtggtgatcgagctaaagcgggatgcccagccgcag
gtggtgcttaacaacctctacaagcaaacccccctgcaggccaacttcggggtcaacatg
ctggccatcctcaacggcgagccgcgcaccctgaccctgcgggacgcgctgcaggctttt
ctggattttcgggaagaggtgatcgagcggcgcacccgctacgagctgcaaaaagccgaa
gagcgggatcacctgctgcagggctatctcttggctttggggcagttggatcgggtgatt
gccctcattcggggagccgccgataccgccacagcccgagaggaattgcaggcggtgttg
ggcctgagcgaagcccaagccgacgggatcctgcagatgcagctgcgccgcctcaccgcc
ctggaagcggaaaaaatccaggccgagcacgaagacttggtgaggcaaattgccgacctg
cgggatattctggcccgccgagaacgggtgatgcagatcatcagcgaagagctgcagcag
ctcaaagcccgctttgccagcccgcgccgttcccgcctctgtttggaggatggggagctg
ggaacggatgatctgatcgaaaatcgggagacggttatctttctaaccgagcagggctat
atcaagcgcatgggccttgaggagttccaggtgcaggggcgagccacccgcggcaaagcc
ggcgcccgcatcaaagaagacgatgccatcgaacagttttttgcctgtcgcagccacgac
accatcctctttttcaccaatcggggcgtagtctataccctgcccgcccaccagatcccc
caggggagccgcgccgcccgcggcagcgccatcgttcagttgctgccgatcacccgggaa
gagcgggttacgtccatggtgccggtgagccagttcagcgacgacgaatatctggtgatg
ctcacccgcggcggctacatcaaaaaaacggccctcagcgcctttgccaatgtacgctcc
aacggcctgattgccatctctctggaagaaaacgacgaactgcgctgggtgcgccgcgcc
cgctccagcgatgatgtggtcatggcgacccgccaaggcatgtccattcgcttcccggcg
gatgacgagcaactgcgccctctgggacgggccacccggggcgtgcgggccattaccctc
aacgccggcgatgacatcgtcagcatggatattatctctgccgaatcggtgatggctgcc
gagcgagagggggagaagctggctaacccttgggtgctggtgatcaccaaagaagggcgg
ggcaagcgctcggccatcgacaatttccgccagcaaaaccgcggcggcaagggggtgatc
gccaccaagttccgccaagcgtcggacgagctggcggccctgcgcatcgtcaatgccgaa
gacgagatcctgttggtaaccgccaggggcattgtcatgcgccagttggccaaggctatt
cccacccagtcccgcgaggcgaccggggtgctggtgcagcgcctggatccggaagacagc
attgtgggagttacagtggtacccgctgccttggttgccgaggaggagacctcagaagcc
agcgcttga
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