Synechococcus sp. JA-2-3B'a(2-13): CYB_1618
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Entry
CYB_1618 CDS
T00319
Symbol
groL-1
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
cyb
Synechococcus sp. JA-2-3B'a(2-13)
Pathway
cyb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cyb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CYB_1618 (groL-1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cyb03019
]
CYB_1618 (groL-1)
03110 Chaperones and folding catalysts [BR:
cyb03110
]
CYB_1618 (groL-1)
03029 Mitochondrial biogenesis [BR:
cyb03029
]
CYB_1618 (groL-1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cyb04147
]
CYB_1618 (groL-1)
Enzymes [BR:
cyb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
CYB_1618 (groL-1)
Messenger RNA biogenesis [BR:
cyb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
CYB_1618 (groL-1)
Chaperones and folding catalysts [BR:
cyb03110
]
Heat shock proteins
HSP60 / Chaperonin
CYB_1618 (groL-1)
Mitochondrial biogenesis [BR:
cyb03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
CYB_1618 (groL-1)
Exosome [BR:
cyb04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
CYB_1618 (groL-1)
Exosomal proteins of other body fluids (saliva and urine)
CYB_1618 (groL-1)
Exosomal proteins of breast cancer cells
CYB_1618 (groL-1)
Exosomal proteins of colorectal cancer cells
CYB_1618 (groL-1)
Exosomal proteins of bladder cancer cells
CYB_1618 (groL-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
ABD02579
UniProt:
Q2JL43
LinkDB
All DBs
Position
complement(1690530..1692164)
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AA seq
544 aa
AA seq
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MAKSIIFSEEARRALEHGMDILAEAVAVTLGPKGRNVVLEKKFGAPQIINDGVTIAKEIE
LEDHIENTGVSLIRQAASKTNDTAGDGTTTATVLAHAMVKEGLKNVAAGANPIALKRGID
KAVKFLVDKIAEHARPVEDSKAIAQVAAISAGNDEEVGRMIAEAMDKVGREGVISLEEGK
SMTTELEVTEGMRFDKGYISPYFVTDTERMEAVLENPYILITDKKITLVQDLVPVLEQVA
RAGRPLLIIAEDIEKEALATLVVNKLRGVLSVVAVKAPGFGDRRKAMLEDIAILTGGEVI
SEERGLKLENARLDSFGTARRVTVTKDNTTIVAEGNEAAVKARCEQIRRQIEETDSTYDK
EKLQERLAKLSGGVAVIKVGAATETEMKDRKLRLEDAINATKAAVEEGIVPGGGTTLAHL
IPVVTEWAQANLSGDELVGANLVARALGAPLRRIAENAGQNGSIVLERVKDKPFNTGYDA
QNDAFVDMFEAGIVDPAKVTRSALQNAASIAGMVLTTEAIVVDKPEPKTNTPASSGSGMS
DYDY
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atggccaaatcaatcatcttcagtgaagaagcccgccgcgctctagagcacggcatggat
attttggcagaagccgtagccgttaccctgggtcccaaagggcgcaacgtcgtgctggag
aagaagtttggcgccccccaaatcatcaacgacggggtaaccattgccaaagaaatcgag
ctggaagaccatattgagaacacaggcgtttccttgatccggcaggcggcttccaagacc
aatgacacggctggggatggcaccaccacggccacggtcttggctcacgccatggtgaaa
gaaggtctgaaaaacgtggctgccggcgccaacccgattgccctaaagcgagggatcgac
aaggcggtgaagtttttggtagacaaaatcgccgaacatgcccgcccggtcgaagattcc
aaagccattgcccaggtggcggccatttccgccggtaacgatgaagaagtgggccgtatg
attgccgaggccatggacaaggtgggccgcgaaggggtgatctccctggaagaaggcaag
tccatgaccaccgagctggaagtgacggaagggatgcgcttcgacaagggctacatctcc
ccttacttcgtcaccgataccgagcggatggaagcggttctggaaaacccctacatcctc
atcaccgataagaagatcaccctggtgcaagacctggtaccggttctggagcaggtggcc
cgcgccggtcgtcctctgctgatcatcgccgaagacatcgagaaagaagcgctggctacc
ctggtggtgaacaagctgcggggtgtgctgagcgtggtagcggtaaaagcccctggcttc
ggggatcgccgcaaggccatgctggaagacatcgccatcctgaccggcggtgaggtgatc
agcgaagagcgaggcctgaagctggagaacgctcgcctcgattccttcggcactgcccgt
cgcgtcacggtgaccaaggacaacaccaccatcgtggcggaaggcaacgaagcggctgtg
aaagcccgttgcgagcaaattcgtcgccaaattgaggaaaccgactccacctacgacaaa
gaaaaactgcaagagcgcctggccaagctctccggcggtgtggcagtgatcaaagtgggc
gcggccactgaaaccgagatgaaagaccgcaagttgcgcctggaagatgccatcaacgcc
accaaagcggcggtagaagaagggatcgttcccggcggcggtaccaccttggcacacctg
atcccagtggtaaccgagtgggcgcaagccaacctgtccggcgatgaactggtgggggcc
aacctggtcgcccgcgctctgggcgctccgctgcgccgcattgctgagaacgccggccaa
aacggctccattgtgctggagcgggtgaaagataagcccttcaacaccggctacgatgcc
cagaacgacgccttcgtggatatgttcgaggcgggcattgtagacccggccaaggttacc
cgttctgccctgcaaaacgccgcttccattgcggggatggtgctgaccactgaagcgatc
gtggtggacaagcccgagcccaaaaccaacacgccggcaagcagcggcagcggcatgagt
gactacgactactaa
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