Synechococcus sp. JA-2-3B'a(2-13): CYB_1640
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Entry
CYB_1640 CDS
T00319
Name
(GenBank) sensory box histidine kinase/response regulator
Organism
cyb
Synechococcus sp. JA-2-3B'a(2-13)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_4
Response_reg
HATPase_c
PAS
HisKA
Hpt
PAS_8
PAS_9
PAS_3
DUF4262
DUF3473
PriA_3primeBD
HSCB_C
Motif
Other DBs
NCBI-ProteinID:
ABD02601
UniProt:
Q2JL21
LinkDB
All DBs
Position
complement(1708080..1712408)
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AA seq
1442 aa
AA seq
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MHRELWAVGKTVGLVDPSGLAFWLLGSLFLALLLLGVSLGESQPLSVFRGILGSLSRRFP
FQPPRGTPSPEARFRAALEASLDAIYLLEAVRDPVTREIRDFVFVDVNAKGEELISLQRR
QIIGQRLCELLPINRWGGFFEKYKRVVETGIPLEEEFPISGQPGLKASWIHHQVVPVGDG
ILITSRDISERVKMERALQESESRYRALYEAIPDLIFELSAEGVILHCKPSPYVPTRHPP
EFYVGCRAQDVFTGSLKEQYPSLAEGALVSQTPQYLEYEVEIEPGIRCYRRACVVAHGRD
KVYILVRDITERKQAELALREMEATQRAILQAIPDLIVRLNRQGICLSFISGGDVHLDCP
AERHLGRSLQEILPPALAEQRLFYVQQALATQTQQRYEYSIEVQGEVRYEEARIVPLNSQ
EVLAIVRDITEAKQAELALKAAEQVQRAILEAIPDLIFRLDSQGICLSFVWGGEVVPYSS
PDTYVGRSLQELLPPELAERRLFFVQQAIATQTRQRYDQSIEIQGETRHEEVRIVPLNPQ
EVVVIVRDVTDRVRSQQAVQESEQKFRALFENAAVAILIRHAETGEILEANSQAISAYGF
SSLEELRAFDASEQSPYRRALRGGEFSLQSYLEQARQQGSARFEWHWQRQDGRVVWEDVF
VQPLVLRGIPCWVFTAVDITARKSAEAELEQFFSVALDLLCIADAQGYFRRLNRAWETTL
GYSLQELQSRPFLEWVHPEDVPATQAAMQQLIEEKRLDHFVNRYRTQDGSYRFIEWRASL
AGSLFYAAGRDITVAKLAEEQMKAAKEAAEAASRAKSEFLATISHEIRTPINAILGMTSL
LLDTSLDPQQQDWVQTIRYGGEVLLNLINDILDFSKIESQKLELEEIPFSLPQLVEELLD
LMAAQAQSKDLELVAWVDPSLPPTLIGDPNRLRQILANLLSNAIKFTPQGEVVVTVEAGE
RDPEKQWVNVQVRDTGIGIPPEKLDRLFKPFSQVDSSISRQFGGTGLGLAISQRLCQLMG
GAIGVESQPGQGSTFRFRIPLKRPDQELLPTAAPDPCLAGKRVLLVEDNASQRQLLSRLL
SAWGMEVTCCALAAEAQAAARTHSFDLALLDATLPGQDGLTLAANLRKAQPRLLPLVLTG
RNFISTADPLPTLAKPVKASQLRKLLLGLVGEKAPSSLSSSPAAPPSIWDATLASRYPLQ
ILVAEDNPVNQKVIRLMLERLGYRPDIVGNGLEAVQALRLRPYDLVLMDMQMPELDGLAA
TRRIRAELPPERQPRIVVLTANVFSEGRAAAQAAGVDGYLTKPLEPAALVRVLQGSLPLP
IPASQEEDPPLDPVILAQMRAVFSSPEAWQEMIQTYRQDSEALLGSLRQALEQRDPQAIA
RLAHRLKGSSSTLGAKRLAELCQQLEKLVHAEPASSVKWDTIEQAVQKLEVAYRQVTLSL
SS
NT seq
4329 nt
NT seq
+upstream
nt +downstream
nt
atgcacagagagctatgggcggtagggaaaacggtgggcctggtggatccctctggcctt
gccttttggctgctgggatccctcttcttggctctcctgctgcttggcgtcagcctgggg
gaaagtcagccgctttctgtcttcagagggatcctgggatccctttctcgaagatttccc
ttccaacctcctagaggcacccccagcccagaggctcgttttcgggcagccttggaagcc
agcttggatgctatttacctgctggaggcggtgcgggatcccgttacccgcgagatccgc
gactttgtctttgtggatgtcaacgccaagggggaagagctcatttccctccagcgccgg
cagatcatcggccagcggctgtgcgagctgctgcccatcaaccgctgggggggctttttt
gagaaatacaagcgagtggtggaaaccggcattcctctggaagaggagttccccatttcg
gggcagccgggcttgaaggccagttggatccatcaccaagtggtgccggtgggcgatggg
atcctcatcaccagccgcgacatcagcgagcgggtcaagatggagcgggctctacaggaa
agcgagtctcgctaccgcgccctctacgaggccattcccgacttgatttttgagctcagc
gccgagggagtcattcttcattgcaagccttccccttacgttcccacccgacatccgcct
gagttttacgtgggttgccgcgcccaagacgtgtttactggctcgctgaaagagcagtat
ccatctctggcggagggggccttggtcagccagacgccgcagtacctagagtacgaagtt
gagattgagccggggatccgctgctatcggagagcctgcgttgtcgctcacgggagagac
aaagtttacatcctggtgcgagatatcaccgagcggaaacaggcggagttggcccttaga
gaaatggaagccacccagcgggccattctccaagccatccccgaccttattgttcgcctg
aatcgccagggcatctgcctgagttttatttccggcggcgatgtccatcttgactgccca
gcagagcgccacttaggtcgatccctccaggagattctgccgccagcgctggccgagcag
cggcttttctatgttcagcaagccctggccacccaaacccaacagcgctacgagtacagc
attgaagttcaaggggaggtacgctacgaagaggcccgcattgtccctctcaacagccag
gaagtcctggcaatcgtgcgggatattacagaagccaagcaggcggagctggccttgaaa
gccgctgaacaagtgcagcgagccattctagaagccattcccgacttgatcttccgcctg
gatagccagggcatttgcttgagctttgtctgggggggcgaggttgttccctatagctca
cccgacacctacgtgggccgatccctgcaggagcttttgccaccggagttggccgagcgg
cggcttttctttgttcagcaggctatagctacccagacgcggcagcgctacgaccaaagc
attgagattcaaggagagacccgccacgaagaggtgcgcattgtgcccctcaacccccaa
gaggtggtggtgatcgtccgcgatgtaaccgacagggtgcgatcccagcaggccgtccag
gaaagcgagcagaagttccgggcgctgttcgagaatgccgctgtggccatcctcatccgc
catgccgagaccggcgagatcctggaggccaactcccaagccatttcggcctatggcttc
tccagcctggaggagctgcgggccttcgacgcttccgagcagtctccctatcgccgggct
cttcggggcggggagttctcgctgcagtcctacttggagcaagcccgccagcagggatcc
gcccgctttgagtggcactggcagcggcaggatggccgagttgtctgggaagacgtgttt
gtgcagccccttgtcttgcgcgggatcccgtgttgggtgtttaccgcggtggacatcact
gcccgcaagtcggcagaagcggagctggagcagtttttctcggtggctctggatttgctt
tgcattgccgatgcccaagggtactttcgccgtctcaaccgagcctgggagaccaccctg
ggctattctttgcaggagctgcagagccgaccctttttggagtgggttcacccggaagat
gtccccgccacgcaggcggccatgcagcagcttatcgaagagaaacggctggatcacttt
gtcaaccgctaccgcacccaggacggcagctatcgtttcatcgagtggcgagcctctttg
gccggatccctgttctacgccgccggacgggatatcaccgtagccaagctggcagaagag
cagatgaaagcagccaaggaagctgccgaagccgccagccgcgccaagagcgagttcctg
gccaccatcagccacgagatccgcacccccatcaacgccattttggggatgaccagtcta
ctcctggacacctccttggatccgcagcagcaggattgggtacagaccatccgctatgga
ggcgaggtgctgctgaacctaatcaacgacatcctcgatttctccaagatcgagtcccaa
aaactggaactggaggaaatacccttttccttgccgcagttggtggaagagctgctggat
ttgatggccgcccaagcccagagcaaggatctggaactggtggcttgggtggatcccagc
ctgccgccaaccttgataggggatcccaaccggctgcgccaaatcctggccaatctgctc
agcaacgccatcaagttcaccccccagggagaggtggtggtgaccgtcgaggccggggag
agggatcctgaaaagcaatgggtcaacgttcaggtgcgggatacaggcattggcattccc
cccgaaaaattggatcgcctcttcaagcccttcagccaggtggatagctccatcagccgc
cagtttgggggcaccggcctgggcttggccatcagccagcgtctctgccagctcatgggg
ggagcaatcggggtggaaagtcagccgggccagggatccacttttcgctttcgcatcccc
ctaaagaggccagaccaggagctgttgccaaccgccgcaccggatccgtgcttggccggc
aagcgggttttgctggtggaagataacgccagccaacggcagttgctatcccgactgctg
agcgcttggggcatggaggtaacctgttgcgccttggcagcagaagcccaggctgcagct
agaacccattcttttgacctagccctgctggatgccactctgccaggccaggatggccta
accttggcggctaacctgcggaaagcgcaaccccgcctgttaccgctagtgctgacgggg
cgcaacttcatctccacagcagaccctctccccactttggccaagccggtcaaagcctcc
caactgcggaagctgctgctggggctggtgggagaaaaagctccttcctccttatcttcc
tctcccgccgctcctccctccatttgggacgcgaccctggccagccgctacccactgcag
atcctggtggcagaggataacccggttaaccagaaggtgattcgcctcatgctggagcgg
ttgggctaccggcccgacatagtcggcaacggtctggaagccgtccaagctctgcgcctg
cgaccctacgatctggtgttgatggatatgcaaatgccggagctggatggtcttgcggcc
acccgtcgcatccgcgctgaactgcctcctgagcgccagcctcgcattgttgtcctcacg
gccaatgtgttttcggaaggccgtgctgctgcccaagctgctggggtagatggctatcta
accaaacccttggagccagccgccctagtccgggttcttcagggatcccttccccttccc
atcccggccagccaagaagaggatccgcccctcgaccccgttatcctcgcccagatgcga
gcagtcttcagctctccagaagcctggcaggagatgatccaaacctaccggcaggacagc
gaagctctattgggatccctgcggcaggccctagagcagcgggatccccaagccattgct
cggttggcccaccgcctcaagggcagcagcagcaccctgggcgccaaacgtctggccgag
ctgtgtcagcagttggaaaagctggttcatgccgagccagccagttctgtaaaatgggat
actatagagcaagccgtgcagaagctggaggtggcatatcggcaagttaccctcagtctc
tcctcctga
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