KEGG   Synechococcus sp. JA-2-3B'a(2-13): CYB_1847
Entry
CYB_1847          CDS       T00319                                 
Symbol
ribD
Name
(GenBank) riboflavin biosynthesis protein RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
cyb  Synechococcus sp. JA-2-3B'a(2-13)
Pathway
cyb00740  Riboflavin metabolism
cyb01100  Metabolic pathways
cyb01110  Biosynthesis of secondary metabolites
cyb01240  Biosynthesis of cofactors
cyb02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:cyb00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    CYB_1847 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    CYB_1847 (ribD)
Enzymes [BR:cyb01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     CYB_1847 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     CYB_1847 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam Inv-AAD
Other DBs
NCBI-ProteinID: ABD02802
UniProt: Q2JKI7
LinkDB
Position
1932557..1933669
AA seq 370 aa
MISDQQWMERCLSLARSTPQRPSPNPRVSCVIVQGDRVVGEGVHPGAGQPHAEVLALQQA
GSLARGATLYVNLEPCNHYGRTPPCTEAILAAGIRRVVVGMQDPNPLVAGKGIRRLQEAG
IDVTVGVLERECQELNEGFAFAIVRQQCFGLLKYAMTLDGKSAAATGHSRWISNSPARQW
VHQQRAWHDAVIVGSRTVWQDNPRLTCRLAELQGSQPLRVVLSRSLNLPPVAHLWQVEEA
PTLVITEAVATHPLWGSLAKQGVELLHLPQVTPSRAAQVLFQRGCLSALWECGGTLAWAA
LKDGAIQKVAAFIAPKILGGAAAPTPVAGEGIPDVNQSWQLVEPRLETLGDNWLIIGKIS
SSVGHSSLLK
NT seq 1113 nt   +upstreamnt  +downstreamnt
atgatttcggatcagcagtggatggaacggtgtctatccctggcccgttccacacctcag
cgtccctctcccaatccgcgggtgagttgcgtgatcgtgcagggggatcgggtggtgggg
gaaggcgttcatccgggggcagggcagccccatgcggaggtgttggctctgcaacaggcg
ggatccctggccagaggggcaacgctctacgtcaacctggagccctgcaaccactatggg
cgcactcccccttgtaccgaggccatcctagctgccgggatccggcgggtggtggtgggg
atgcaggatcccaatcccttggtggccggcaaagggatccgacgcctgcaggaggcgggg
atcgacgtgacggtgggagtgctggagcgggagtgccaggagctgaacgaggggtttgcc
ttcgccattgtgcggcaacagtgtttcggcctgctgaaatacgccatgaccctggatggc
aagagcgccgccgccaccggccacagccgctggatcagcaactctccggcgcggcagtgg
gtacaccaacagcgggcctggcatgatgccgtcatcgttggatcccgaaccgtttggcag
gataacccgcgcctcacctgtcgcctggcggagttgcagggatcccagccgttgcgggtg
gtcctcagccgttccctgaacctacctcccgtcgcccatctgtggcaggtggaagaagcg
ccgacgttggtgatcacagaagctgtggcaacccatcctttgtggggatccctggccaag
cagggggtggagctgctgcatctgccccaagtaaccccctcgcgggcggcacaggtgctc
tttcagcgggggtgtctgagtgccctctgggaatgcgggggcacgctggcctgggcagcc
ctcaaagatggggcgatccagaaagtagccgccttcatcgctcccaagatcctaggcgga
gccgctgcgccaaccccggtagcaggggaggggatccctgatgtaaaccagagctggcaa
ctggtggagccccggctggagaccttgggggataactggttgatcatcggaaagatctcc
tcttcagttggccacagtagcctactaaagtga

DBGET integrated database retrieval system