Synechococcus sp. JA-2-3B'a(2-13): CYB_1970
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Entry
CYB_1970 CDS
T00319
Name
(GenBank) RecF/RecN/SMC N terminal domain protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
cyb
Synechococcus sp. JA-2-3B'a(2-13)
Brite
KEGG Orthology (KO) [BR:
cyb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cyb03400
]
CYB_1970
DNA repair and recombination proteins [BR:
cyb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CYB_1970
Archaeal homologous recombinant proteins
CYB_1970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
AAA_15
AAA_21
SbcC_Walker_B
AAA_29
Spectrin_Anc-1
DivIC
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
ABD02919
UniProt:
Q2JK76
LinkDB
All DBs
Position
complement(2066705..2070322)
Genome browser
AA seq
1205 aa
AA seq
DB search
MGSRRLIMRILSLALQNFKSHEDAVFTFEPGINAICGENGAGKTSILEAIAWVLFDYCPY
SQEEIIRSGANDAVVTVQFISQWDQRTYDVRRSVTQGYRLFDPQLKQRLEYERKSDVLPW
LRQHLGVPAGTDLARLFATTIGVPQGTFTADFLKTGRDRKEVFDRILKVEEYQQVAKDLL
AVEKYSEAQIQAINHQIELLRQQLQEWDPLQAERQKIQQELSYWQERLSQSIHTLDQVKL
EIERLEKWLEQIQTLDHQIAQLEQKGSLLQVSLEQAEKLWAEARQAQAQQQQYWEGSQHF
LATEARLRELEKQQQQRLEWLKQRDALLSQKQHIENQLARLQEKLSQQQRWKQELEELTP
QIQAQEELERQQTYWTQQLNTLLHLHREWEQIQAEWTAHAERCQLLQSRVQEAEQAQATC
RQHQLTYNRYLQLETLIAEQEALRRTRQTLLAQRETLQHQLHRLELQGSEYQQQLQIFQK
MEAEKLELQPLCERQASLEQRHSQLGEKLASFQALRLELKQRETEQEQGQVQLQQLQLQL
RQRQADLERVAAIPALETQQERLQTQLSRIAAARQFQQELQALFEQGSDQLAQHHHSIRQ
LLDELEAQRHNYPQLQSLWQRIPEVLTRSSALSQQLLQSIHQILQDLAPQTSEPQLRQQL
SNIQKQLRTLQPLLGLTAQIPDLQAQIQQLLQLQAERQSRIDDLHWDLEAEPTFLRQQQE
IGQALQELGDPRGQIQRLERDLSRKSRVEQEYQQIAAHVQQLQQQIQALEEQLQPLSDLD
ERIAALREEQGRHRNNYETFIRMQPLAQSLPRRQDELQAAQLALDQIQKAKQEKQAQIDR
WEQTEGSKDDLQAQIEKAAKTLKSLGDPRSQAERLKAELKQEKQYLQMQADCLQQLQDLQ
AALNPIEEALCQTEHLDRELGSLQEERERYRLDHERYLQAEPIAQLLPQREQELAELNAQ
RQQLQTQLSQLRAARDPLAALYRPQEHEHLRSLLQATEIQKAEAQARLESLAPQLSKIEE
KLRQLEQAKASLKQVEAEKTERERLHRFIKFSRETYRKAGPQVTQYYLQQINHTADHLFR
EILNRPNVTLTWEADYEIRVQEAGSPKRRFASLSGGEQMSAALAVRLALLKVLGQLNIAF
FDEPTTNMDTQRRQRLAEAITNLRSFEQLFVISHDDTFEQMTENVIRVERHSGSKSVGRD
PAYGV
NT seq
3618 nt
NT seq
+upstream
nt +downstream
nt
atggggagcagaagactgattatgcggatcctctctctcgctttacaaaacttcaaatct
catgaggatgccgtcttcacgtttgagccaggtattaacgccatttgcggagaaaacgga
gcgggcaagaccagcattttggaagccattgcctgggttttgttcgactactgcccctac
agccaagaagaaatcattcgctccggggccaacgacgcagtggtgactgtgcaatttatc
tcccaatgggatcagcgcacctacgatgttcgccgcagcgtaacgcagggatatcgtctc
tttgatccccagctgaagcagcgcctagagtatgagcgcaagtccgatgtgctgccgtgg
ctgaggcaacatttgggcgtacctgccggtaccgacctggcgcggctctttgccacaacg
attggggtgccccaagggactttcacggcagactttctcaaaaccggtcgagatcgcaaa
gaagttttcgatcgcatcttaaaggtggaagagtaccagcaggtagccaaagacctgttg
gcggtcgaaaaatacagcgaggcgcagattcaggccattaatcatcaaattgaattgctc
cgccaacagctacaggagtgggatccgctgcaagcggagcggcagaaaatccaacaagaa
ctgagttattggcaagagcgcttgagtcaatcgatccacactctggatcaggttaagctt
gagatcgagcgactggagaaatggcttgagcaaatccaaactttagatcaccagattgcc
caactggagcaaaagggatccctgcttcaggtatctcttgagcaggcagaaaagttatgg
gcagaggccaggcaagctcaagcgcagcaacagcaatactgggagggatctcagcatttt
ttggccacagaagctcgcttgcgggagctggaaaaacagcaacagcaacgcttggagtgg
ctgaaacagcgggatgctttgctctcgcaaaagcagcatatcgaaaaccaattggcaaga
cttcaagaaaagttaagccaacagcagcgctggaagcaggagctagaggagctaaccccg
caaattcaggcccaagaggagctagagcgtcagcagacctattggactcaacagctcaac
acgttgctacacctgcaccgcgaatgggaacagatccaggcagaatggacagcccacgcc
gagcgctgtcaactgctacaaagccgagtgcaagaagctgaacaggcccaggccacatgt
cggcagcatcaattgacctacaaccgttatttgcagttggaaaccctcattgcagagcag
gaagcgctgcggcgaacccgacaaactttactggctcaacgggaaactttgcaacatcaa
ctgcatcgattggagctgcagggatccgaatatcagcaacaactccagatcttccaaaaa
atggaggcggaaaaacttgagctgcaacccctgtgtgaacggcaggcctccctggagcag
cgccactcccaacttggcgagaagttggcttcctttcaggctctgcgccttgaactcaaa
caacgggaaacggagcaggaacaaggccaagtccaattgcaacaactgcagctccaactg
agacaacggcaggcggatttggagcgggtagccgccattcctgcgctcgaaactcaacag
gagcgattgcaaactcagctcagccgcattgccgcagctcgtcaatttcaacaggagcta
caagccctttttgagcagggctcggatcaattggctcaacaccatcacagcatccggcaa
cttctggacgaattggaagcgcagcgacacaactatccccaacttcaatctctgtggcag
cggatcccagaggtactcactcgatcttcagcactcagccaacagttgctccagtccatc
catcagattttgcaggatctggctccccaaacttccgagccccaacttcgtcagcagttg
tccaacatccaaaaacaactcaggactttgcaacccttgctcggcctaaccgcacaaata
cccgatttacaagcccaaattcagcaactgctgcagttgcaagccgaacgacaaagcaga
attgatgaccttcactgggatcttgaggctgagcccaccttccttcggcaacaacaggaa
attggccaggcgctgcaagaactgggggatcccagagggcaaatccagcgcttggaaaga
gatctcagccgcaagtctagggttgagcaagaatatcaacaaatagcggcccatgttcag
caactccaacagcagatacaagccctagaagagcagctgcaaccgctttcagatctggat
gaaagaattgcagctttgcgggaagaacaaggccggcaccgcaacaactacgagaccttt
atccgcatgcagcctcttgcccaaagtttgccccgacggcaagatgaactccaagcggcc
cagttggccctagatcaaatccagaaagccaagcaagaaaaacaagcccagatcgaccgc
tgggaacaaacagagggatccaaagatgacctgcaagcccaaattgaaaaagccgccaaa
accttaaaatctctgggggatcccagaagtcaagccgaacggctcaaagcagagctaaaa
caggaaaagcagtatttacaaatgcaggccgactgcctgcagcagcttcaggatttacag
gccgcactcaaccctatcgaggaggccctatgccaaacggagcatctggatcgagagctg
ggatccctgcaggaagaacgcgaacgataccgtttagatcacgagcgctatctgcaggca
gaacccattgcccaattgcttccccagcgggaacaggaactggccgagctaaacgcccag
cggcagcaactgcaaactcagctttcccaacttcgcgcagcacgggatcccttagctgct
ctgtatcgaccgcaggagcatgagcatcttcgatcccttctgcaggccaccgaaattcaa
aaagctgaagcccaagcccgactggagagcttagctcctcaactgagcaaaattgaggaa
aagttgcggcaattggaacaggccaaggccagcttaaagcaagtcgaggccgaaaaaact
gagagagaacgcctacaccgctttatcaaattcagccgagagacctacagaaaagccggc
ccccaagttacccaatactacctgcagcagattaaccataccgccgatcacctcttccga
gaaattctcaaccgtcccaacgtcaccctgacctgggaagccgattatgagatccgcgtt
caagaagccggcagccctaaacggcggtttgccagcctttccgggggagagcaaatgtcg
gcggccttggcagtgcgcttggctttactcaaggtgttgggacaactaaatattgccttt
ttcgatgagcccaccaccaatatggatacccaacggcgacagcggctggcagaggctatt
accaacctgcgatcttttgagcagctgtttgtcatcagccacgacgatacctttgagcaa
atgacagaaaatgttattcgggtggaaaggcactccggatccaagtcggtagggagggat
cccgcctatggtgtttag
DBGET
integrated database retrieval system
