Synechococcus sp. JA-2-3B'a(2-13): CYB_2940
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Entry
CYB_2940 CDS
T00319
Name
(GenBank) putative chromosome segregation protein SMC
KO
K03529
chromosome segregation protein
Organism
cyb
Synechococcus sp. JA-2-3B'a(2-13)
Brite
KEGG Orthology (KO) [BR:
cyb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cyb03036
]
CYB_2940
Chromosome and associated proteins [BR:
cyb03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
CYB_2940
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_21
AAA_15
AAA_29
Motif
Other DBs
NCBI-ProteinID:
ABD03859
UniProt:
Q2JHS4
LinkDB
All DBs
Position
complement(3042235..3045801)
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AA seq
1188 aa
AA seq
DB search
MYIKRIELTRFKSFGSTTSLPLLPGFTVISGPNGSGKSNILDGILFALGLSSSRGMRAER
LLDLVHSGSLNGNRQVETHVSVTFELGPGEDGQPREWKVSRRLRVRPGKAEELARDSGTE
SFSLPYTSTFYINDVPCTLSELHEQLEAMHIYPNGYNVVLQGDVTSIISMHPKERRQIID
ELAGVATFDRKIAQANSKLEAVREQIERFRLIEQEWQAQGERLLKESEKAQHHQQLRLQL
QTLGQQQQVLLWRHLQVQVEETQAAIQRFLETQEQATAQVQTLNDHLQQAEAALGELQSR
IHALGEEEYLHLQAQIAAAEAQRQQVSRQIAAWQEEIQQAQRLHQECQAQQQHLQAELEH
LHSQQEQLAQAQGSLQAQVQKAQISLEQSREQLRALAQSADAWVKQQRYLTRHIEELRAE
QEPLQQEQIRLQERQRQLERQSQEIQAEIAQIEAWLGSHLALTAELEHTCRQSEAQVQTL
AQELAQLQASLELDRATHERLTVELHAKQRQLDKWETRRQVLQESQGSRATQAILSARLP
GVLGLVAQLGQVDPQYQLALEVAAGNRLHFVVVEDDTVAVSAVNFLKREKAGRATFLPLN
KLQPTRPPSPLKLDGLIDYAIRLVRFEERYRDVFGFVFGSTLVFQSLELAQPHIGKHRMV
TLEGELLETSGAMTGGSAPQRAGIHFSVGEPSEEAALRSRLAELEELLAALTLRLQAAQA
REKQLAQALLLARQDALQAQQYLERHQADCQKQQARLQHLQGSLAQRQSESHQIQQRLQQ
IQLRWDPLQQRLADLTLKLSQLEGSPVNQHWQQLQQTVQQQESRLAELQQQLTQLERQQQ
ENSGQQHLKQAQIQHHQERLQESKQRQAYLQEQIVQAQATLGQIQQHLAEQRQQMSQIEA
RLSHLRQERDRQEFQLRAQQQQIQRLEWERYNALTQQQEKEALLAQLQTQLQAVAQELPD
PLPNLPATLTLDELQRQKRKIEEQLRSLEPVNMLAIAEYEQTQARLRDLSAKLETLHQER
TELLLRIENFSTLRRQAFLDAFHAVNGHFQTIFAQLSDGDGHLELENPEDPFAGGLTLVA
HPKGKPVRRLSAMSGGEKSLTALSFIFALQRFRPSSFYAFDEVDMFLDGANVEKLANMIW
QQSRQAQFLVVSLRRPMIEKAEHTIGVTQARGAYTQVIGLTKPAPHPS
NT seq
3567 nt
NT seq
+upstream
nt +downstream
nt
atgtacatcaagcggattgagctgacccgatttaagtcgtttggcagcaccacctcgttg
cccctgctgccgggctttacggtcatttccggccccaatggctccggtaagtctaacatc
ctggatgggatcctgttcgcgctgggtttatcgtcctcgcgggggatgcgggcagagagg
cttttggatctggtgcattccggcagcctcaacggcaatcggcaggtggaaacccacgtt
tccgtcacctttgagctggggccaggagaagatggccagcccagggaatggaaagtcagt
cgccggctgcgggtcaggcccggaaaggctgaggagctcgcccgcgatagtgggacggag
tccttttctctcccctacaccagcaccttttatatcaacgatgtgccctgtaccctgagc
gagctgcacgaacaactggaggcgatgcacatctaccccaacggctacaacgttgtttta
caaggggatgtcaccagtatcatttccatgcaccccaaggaacggcggcagatcatcgac
gaattggcgggggtggccaccttcgaccgcaagatcgcccaggccaacagcaagctggag
gcggtgcgggaacaaattgagcgttttcggctcatcgaacaggaatggcaagcccaggga
gaacggctgctcaaagagagcgaaaaggctcaacaccatcagcaactgcggctgcagctg
caaacgctggggcagcagcaacaggtgttgctttggcggcatttgcaagtccaagtggaa
gaaacccaggcggccattcagcggtttctggaaactcaggagcaggccactgctcaggtg
cagaccttgaacgatcatttgcaacaggccgaagccgccctgggcgagttgcaaagccgc
atccatgctcttggagaggaggaatacctgcacctgcaagcccaaatcgccgccgccgaa
gcacagcggcaacaggtcagccgacagatcgcagcctggcaggaggagatccagcaagcg
cagcgcctacatcaggagtgccaagcccaacagcagcatctgcaggcggagctggaacac
ctgcacagccaacaagagcaactggcccaagcccagggatccctgcaggcccaggttcag
aaagcccaaattagcttggaacagagccgcgaacagctgcgcgccctagcccaatccgct
gatgcctgggtgaaacagcagcgctacctcacccgccacattgaggaacttcgcgccgaa
caggagcctctccaacaggagcaaattcgcctgcaagagcgacaacggcaactggaacgg
caaagccaagagatccaggcggagattgcccagatcgaggcgtggctgggatcccacctg
gccctcaccgccgagctggaacacacttgccgacagtcggaagctcaggttcaaactttg
gcccaagagctggcgcaactgcaggccagcctggagttggatcgcgccacccacgaacgc
ctcaccgtcgagctgcacgccaagcagcggcaactggacaaatgggaaacccgccgccaa
gtgttgcaagaatcccagggatcccgggcgacccaagccatcctgagtgcccgtctgccg
ggggttttggggttggtggcccagttggggcaggtggatccccagtatcaactggccctg
gaggttgcagcaggcaaccggctgcactttgtggtggtggaggatgacaccgtggccgtg
agcgctgtcaactttttgaaacgggaaaaagccggacgcgccacctttttgcccttgaat
aagctccagcccacccgcccccccagccccctgaaattggacggcctgatcgactacgcc
attcgtttggtgcgttttgaagagcgctaccgggatgttttcggctttgtgttcggctcc
accctggttttccaaagcctagagctggcccagccccacatcggcaagcaccgcatggtt
actctggaaggggagctgttggaaacttcgggcgccatgaccggcggcagcgccccccag
cgagctgggatccatttttctgtcggcgaaccttccgaggaggccgccttgcgctcccgc
ttggccgagctggaggaactgctggccgccctcaccctgcgcctacaagcagcccaagcc
cgcgaaaaacaactggcccaagccctgctcctggctcgccaagacgccctgcaagcccag
caatatctggagcggcaccaagccgactgccaaaagcaacaggcccgcctgcaacacctg
cagggatccctggcgcaaaggcaaagcgaaagccaccagatccagcagcggctccagcag
attcaactgcgttgggatcccttgcaacagcgcctggccgatctcaccctcaagctcagc
caactggagggatccccggtgaaccaacattggcagcaactgcagcagacggtgcagcag
caggaaagtcgcttggcagagctgcagcagcaactgacccaactggagcggcaacagcag
gagaactccggccaacaacacctgaaacaggcccaaatccagcaccaccaggagcgcctg
caggagagcaaacagcgccaagcctatctgcaggagcaaatcgtccaagcccaagccacc
cttggccaaatccagcaacaccttgccgagcaacggcaacagatgagccagatcgaggcc
cgactttcccacctgcgccaagagcgagatcggcaggaatttcaactgcgggcccaacaa
cagcaaatccaacgcctggagtgggaacgctacaacgccctcacccaacaacaggaaaaa
gaggccctgctggcccaactgcaaacccaactgcaagcggtggcccaagagctgccggat
ccgctgcccaacttgcccgccaccctgaccctagacgagctgcaacggcaaaaacgcaaa
atcgaagagcaattgcgatccctggagccggtaaacatgctggccattgccgaatacgaa
cagacccaagctcgcctgcgggatctcagcgccaaactggaaaccctgcaccaagagcgc
accgagttgttgctgcgcatcgagaacttttccaccctgcgtcggcaagccttcttggat
gcctttcatgccgtcaacggccattttcagaccatctttgcccaactttccgatggggat
ggccatttggaattggaaaacccagaggatcccttcgcaggcggtctaaccttggtggcc
caccccaaaggcaagccggtgcgccgtctcagcgccatgtcgggaggagaaaaatccttg
acagccctcagctttatttttgctctgcagcgattccgcccttccagcttttacgccttt
gatgaagtagatatgtttttggacggggccaatgtggaaaaattggccaatatgatctgg
cagcaatctcgtcaggcgcagtttttggtggtcagtttacgccgccccatgatcgaaaaa
gctgagcacaccattggtgtaacccaggcccgcggtgcatacactcaggtgatcggcctg
accaaacccgcccctcaccccagttaa
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