Gloeothece citriformis: PCC7424_0649
Help
Entry
PCC7424_0649 CDS
T00808
Name
(GenBank) excinuclease ABC, A subunit
KO
K03701
excinuclease ABC subunit A
Organism
cyc
Gloeothece citriformis
Pathway
cyc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cyc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PCC7424_0649
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cyc03400
]
PCC7424_0649
DNA repair and recombination proteins [BR:
cyc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PCC7424_0649
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
PCC7424_0649
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_23
AAA_16
AAA_29
RsgA_GTPase
AAA_21
nSTAND1
nSTAND3
AAA_33
DnaJ_CXXCXGXG
AAA_22
Viral_helicase1
AAA_18
NACHT
BCA_ABC_TP_C
ATPase
cobW
MeaB
MMR_HSR1
FtsK_SpoIIIE
Motif
Other DBs
NCBI-ProteinID:
ACK69109
UniProt:
B7KET4
LinkDB
All DBs
Position
complement(716118..719126)
Genome browser
AA seq
1002 aa
AA seq
DB search
MFGYRSPRSPGKRYHNERLLSVASFMSNPNRIYIRGARQHNLKNIDLELPRDHLIVFTGV
SGSGKSSLAFDTIFAEGQRRYVESLSAYARQFLGQLDKPDVDAIEGLSPAISIDQKSTSH
NPRSTVGTVTEIYDYLRLLFGRAGEPHCPLCDRNIAPQTIDQMCDRIMELPDRTRFQILS
PVVRGKKGTHKQLLSSLASEGFVRIRIDGEVRELTDDIELDKNYKHDIEIVVDRLIKKPG
IQERLADSLTTCLRHSTGIAVIELLEQPSEDADYPHSTSIEQNTTKDLNRQELGQKNRQE
ITFSENFACPEHGAVMEELSPRLFSFNSPYGACSHCHGLGSLKTFSADLVIPDVNQPVYS
AIAPWSDRDNSYYLSLLYSVGKACGFDIQTPWKKLTPEQQNILLSGREEPIWFEGESRYK
EKKGHFINFAGVLNILERTYQETSSDLIKQKLEKYIIDQPCEVCQGKRLKPEALAVRLGQ
YRMTDLTEVSIRECLERIAQLNLTPRQAVIGQLALKEIISRLQFLMDVGLDYLTLNRAAM
TLSGGEAQRIRLATQIGSGLTGVLYVLDEPSIGLHQRDNGRLLNTLKKLKSLGNTLIVVE
HDEDTIRAADHLVDIGPKAGIHGGEIVCQGSLETLIKTENSLTGAYLSGRRVIETPATRR
EGNGLSLYLKDCHLNNLKHIDVEIPLGKLVSITGVSGSGKSTLINELLYPALQHHLSRHV
PFPKQLGAIKGLEAIDKVIVIDQSPIGRTPRSNPATYTGIFDTIRELFAQTVEAKARGYK
PGQFSFNVKGGRCEACAGQGVNVIEMNFLPDVYVQCEVCKGARYNRETLQVKYKGYSISE
VLDMTVEEALEVFQNIPRAVNRLQTLVDVGLGYIKLGQSAPTLSGGEAQRVKLATELSRR
ATGKTLYLIDEPTTGLSFYDVHHLLNVLQRLVDKGNSIIVIEHNLDVIRCADWIIDLGPE
GGDRGGEIIAEGTPEEVAQNKRSFTGEFLQKVLNREQLIVNS
NT seq
3009 nt
NT seq
+upstream
nt +downstream
nt
atgttcggctatcgctccccaagatctccaggcaaacgctatcataatgaaagactctta
agtgttgcctccttcatgtctaatcccaatcgtatttacattcgcggcgcaagacaacac
aatttaaaaaatatcgatctcgaacttccgcgagatcacttaattgtatttactggggta
tcgggttcgggtaaatcttccctcgcttttgataccatttttgccgaaggacaacggcgt
tatgtggagtctctcagtgcctatgctcggcaatttttgggacaattagataaaccggat
gtggatgctatcgaaggacttagtccggctatttctatcgatcaaaagtccacctcccat
aaccctcgctctaccgtaggaactgttacggaaatctacgactatcttagacttcttttc
ggtcgtgcgggtgaaccccattgtccactttgcgatcgtaatattgctcctcaaacgatt
gatcagatgtgcgatcgcattatggaactcccggatcgcacccgttttcaaattctttcc
cctgtagtacgcggaaaaaaaggcactcacaagcaattattatcgagtctcgcctctgaa
gggtttgtccgtattagaattgatggagaggttcgggaattaaccgatgatatcgaactc
gataaaaattataaacacgatatcgaaattgttgtcgatcgtttaatcaaaaaaccaggc
attcaagaacggttagctgactctctaactacctgtttgcgccattctacgggaattgca
gtcattgaacttttagagcaaccctccgaggacgcagactatccccattctacctctata
gaacagaataccacaaaagacttaaatagacaagaattggggcaaaaaaatcgtcaagaa
attacattttcagagaactttgcttgccctgaacatggggcagtgatggaggaattatct
cctaggttattttcgtttaattccccttatggggcctgttctcattgtcatgggttagga
agtttaaaaaccttttctgctgacttagttattcccgatgttaatcaaccggtttatagt
gcgatagcgccttggtcagaccgagataattcttattatttgtccttattatatagtgta
ggaaaagcctgtggatttgatatccaaaccccttggaaaaaactcactccagaacaacaa
aatattttattgtctggacgagaagaaccgatttggtttgaaggagagtctcggtataaa
gaaaagaaaggtcacttcattaattttgccggagttttaaatatattagagcgcacttat
caagagacatcttcagatctcattaaacaaaaactcgaaaaatatattattgatcaacct
tgtgaagtttgtcagggaaaacgactcaaaccggaagctttagccgtccgattaggacaa
tatagaatgacagatttaaccgaagtttctatccgagagtgtttagaaagaatcgctcag
ttaaatttaacccctcgacaagcagtaatcggacaacttgccttaaaagaaatcatctcc
cgcttacaatttttgatggatgtggggttagattatttaactctaaatcgggcagccatg
accctatccggaggagaagctcaacggatcagattagccactcaaattgggtcaggatta
acgggggtattatatgtcttagatgaaccgagtataggattacatcaacgggacaatgga
cggttattaaataccctgaaaaagctgaaaagtttaggcaataccttaattgttgttgaa
catgatgaagatacgatccgagcggcggatcatctggtagatattggccctaaagccggc
atacacggcggagaaatcgtctgtcaagggagtctggaaaccttaattaaaaccgaaaac
tctttaacgggagcgtatttatcgggacggagagtcatagaaactccggctaccagacgg
gaaggaaatggactctctctatacttaaaagactgtcatttaaataaccttaaacacata
gatgtggaaattcctctcggtaaattggtgagtattactggggtatccgggtcaggaaag
tctaccctaattaatgagttgttatatccggcgttacaacatcatttatcccgtcatgtt
ccctttcctaaacagttaggagcaatcaaaggattagaggccattgataaagtcattgtc
atcgatcaatcgccgatcgggagaactcctcgttctaatccggccacttataccggtatc
tttgataccattcgtgaattgtttgctcaaactgtagaagctaaagcgagaggatataaa
cccggacaattttcttttaatgttaaagggggacgatgtgaagcttgtgccgggcagggg
gtaaatgtcatcgaaatgaactttttaccggatgtttatgtgcagtgtgaggtgtgtaaa
ggcgctagatataatcgagaaacgttacaggttaaatataagggatattctatttcagaa
gtgttagatatgacggtagaggaagccttagaagtgtttcaaaatattcctcgtgcggtt
aatcggttacagaccttagtggatgtcggattagggtatattaaattaggacaaagtgcc
ccaactttatccggaggagaagcacaacgagtaaaattagccactgaattatcccgccgg
gcgactggaaaaaccttatatttaatcgatgaaccgacaaccggattatcgttttatgat
gtgcatcatttattaaatgttttacagaggttagtcgataagggcaattcaattattgtc
attgaacacaatttagatgtgattcggtgtgcagattggattattgatttagggccagaa
ggaggagacagaggaggagaaattatcgccgaaggaacacccgaagaagtagcgcaaaat
aagcggtcttttactggggagtttttgcaaaaagttttaaatcgtgaacagttaatagtc
aacagttaa
DBGET
integrated database retrieval system
