Gloeothece citriformis: PCC7424_1034
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Entry
PCC7424_1034 CDS
T00808
Name
(GenBank) ATP-dependent DNA helicase, RecQ family
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
cyc
Gloeothece citriformis
Pathway
cyc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cyc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PCC7424_1034
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cyc03019
]
PCC7424_1034
03400 DNA repair and recombination proteins [BR:
cyc03400
]
PCC7424_1034
Enzymes [BR:
cyc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PCC7424_1034
Messenger RNA biogenesis [BR:
cyc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
PCC7424_1034
DNA repair and recombination proteins [BR:
cyc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
PCC7424_1034
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
Motif
Other DBs
NCBI-ProteinID:
ACK69488
UniProt:
B7KJN9
LinkDB
All DBs
Position
1137684..1139204
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AA seq
506 aa
AA seq
DB search
MVGFRHCSAVRPLTQPIFHDTLIIMNDVAFDCNQVRTRFKEIWGYDDFRPPQGEIIDTLL
KSKDALIVMPTGGGKSICFQLPALLKTGLTLVVSPLVALMENQVQELQQRQLPAALLHNE
IPRPQRKQTLQALEKQNLRLLYLSPETLLSPPIWEKLSHPQLKINGIILDEAHCLVTWGS
TFRPAYRRLGTIRPTLLQYKPPNTKIAIAAFTATADPDAQRIITEVLQLDSPETFINSPY
RNNLNLKVKITLSPGCRRHQLLQFIKTQKKQSGLVYVRSRRDSEQLSEWLRSLNYSTAAY
HAGLSSQERRYIETQWLQGHLQFVVCTSAFGMGINKADVRWVVHFQAPQLLSDYLQEVGR
GGRDGKPTEALTLMSEPTGWLDPTDNQQWQFFTSKLSKQYQQAEKIAKQIPSQGNINAIA
QEFPEGEISLALLHSKGQLEWLDPFHYQLLKKSSSLTQSQNTPLQTHSQIKRYLTTKRCR
WQFLLNGFGFTQEATGFKCGHCDNCQ
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atggttggatttcgtcattgttccgcagttcgtcccttaacccaacctatctttcatgat
accttgataataatgaacgacgttgcattcgattgtaatcaagtccgcacaaggtttaaa
gaaatttggggatatgatgattttcgtcctcctcaaggagaaattattgacacgctttta
aagtctaaagatgctttaattgttatgccaactggaggaggaaaatcaatttgttttcaa
cttcccgccttattaaaaaccggattaactttagtggtttctcccctcgttgctttaatg
gaaaatcaagtacaagaattacaacagcgtcaacttccagcagctttattacataatgaa
atccctcgtccacaacgaaaacaaactttacaagcactcgaaaaacaaaatctaagatta
ctttatctttctccagaaaccttattaagtcctccaatttgggaaaaattatctcatcct
caactcaaaattaatggcataattttagatgaagctcattgtttagtcacctggggaagt
acctttagacctgcctatcgtcgtttaggaacaataagacccactttattacagtataaa
cccccaaacacgaaaatagcgatcgctgcttttaccgctaccgccgatccagatgcacaa
cgtatcattacagaggtacttcaattagattccccagaaacgtttatcaatagtccttat
cgaaataatcttaatttaaaagttaaaattactctttctcctgggtgtcgtcgtcatcaa
ttattacaatttattaaaactcagaaaaaacagtccggtttagtgtatgttcgttcccgt
cgagatagcgaacagttaagcgagtggttacgatcgttaaattattctactgctgcttat
catgccgggttaagttcccaagaaagacgatatattgagacacaatggttacagggtcat
cttcaatttgttgtctgtacctctgcttttgggatgggaattaataaagcggatgttcgt
tgggtggttcattttcaagcgcctcaactcctgtcagattatcttcaggaagtggggaga
gggggaagagacggaaaacctaccgaagcattaaccttaatgagtgaacctacgggatgg
ttagatccgacggataatcaacaatggcagttttttacctctaaattatctaaacaatac
caacaagcagagaaaattgctaaacagattccctctcaaggaaatattaatgcgatcgca
caagaatttccagagggagagatttctctagcgttacttcatagtaaaggtcaactggaa
tggttagatccttttcactatcagttgctgaaaaaatcttcgagtttaactcaatctcaa
aatactcctctacaaacacactctcaaattaagcgatatttaaccacaaaacgatgtcga
tggcaatttttactgaatgggtttggatttacccaagaagcgacaggatttaaatgtggt
cattgtgataattgtcaatag
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