Gloeothece citriformis: PCC7424_1229
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Entry
PCC7424_1229 CDS
T00808
Name
(GenBank) Exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
cyc
Gloeothece citriformis
Brite
KEGG Orthology (KO) [BR:
cyc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cyc03016
]
PCC7424_1229
Enzymes [BR:
cyc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
PCC7424_1229
Transfer RNA biogenesis [BR:
cyc03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
PCC7424_1229
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNB
HTH_RNase_II
CSD_RNase_II
RNase_II_C_S1
Motif
Other DBs
NCBI-ProteinID:
ACK69677
UniProt:
B7K7A9
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All DBs
Position
1350961..1352991
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AA seq
676 aa
AA seq
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MEKGTLSKGKLIEFRLQGDRRLAVVDRPEGKKDWIVIDEGGQAHKIRPQRVEFEVSGGPY
THQDIPNFLKQVQPLVDPSSLEIAWELLVEDGTPVTPEEMALLLFSESSPVLSYAAHSLL
CEDKIYFKNKGESYEPRSANQVQEIKHQLEVEQQRQREKEGFYARVQKALENEPIDWLDS
DRPRLEALEKLVLQPEQKNQAAQDLLSSLGRSTTPEAALELLIELGWWSPHENLFLRRSS
YPVQFSKRVLEVAKHCLESPPPDPDVVRLDLTHLKIYTIDDESTKEIDDGLSVEQLENGT
TRLWIHIADPSRLVSPGDELDLEARKRSTSLYLPTGMISMFPPELATGPMSLVQGQICPA
LSFGVILKEDGSVEDYIIHASLVKPTYRLTYDDVDEILQLDIKAEPEVKILADSAARRLE
WRKSQGSINISMPEAVIKVKENDEIIIELLETSRSRQLVAEMMILAGEVAGHYCQHHELP
VPFRGQPQPELPPEEELIVLPAGPVRSCALRRCMPRSELGTSPSRHASLGLDVYTQVTSP
IRRYTDLLTHFQLKAHLRGDPLPFSGDQMQEILFSVATSASEATSVERQTNRYWGLEFLR
RNGNQTWYAILLRWLREEENLGLILLEELGLELPHRFERPLALGERFAVQVTRSDPHRDE
IRFREMLSHEIQSAIS
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
gtggaaaagggcacactctcaaagggaaaattaatagaattcagactacaaggcgatcgt
cgtttagcggtagttgatcgtccagaaggaaaaaaagactggatcgtaatcgatgaagga
ggacaagcgcataaaatacgtcctcaacgggttgaattcgaggtaagtggggggccttat
acccatcaagatattcccaatttcctcaaacaagtacaacccctcgtcgatccatcgagt
ttagaaatagcctgggaattgctggtagaagacggaacaccagtcactcccgaagaaatg
gctttattattattttctgaatctagtccggttttatcttatgccgcccatagcttactt
tgtgaagataaaatttattttaaaaacaaaggagaaagttatgagcctcgttcggcgaat
caagttcaagaaattaaacatcagctagaagtagaacaacaacgtcaacgagaaaaagaa
gggttttatgctcgtgtccaaaaagcgttagagaatgaacccatagactggttagatagc
gatcggcctcgtttagaagcgttagaaaaattagtgcttcaacccgaacaaaaaaatcaa
gccgcgcaggatcttctcagttctttgggacgctcaacaactccagaagcagcattagag
ttacttattgagttaggatggtggagtcctcacgaaaacctgtttctccgtcgaagttca
tatcctgtccaattttccaaaagggtgcttgaagtggcaaaacattgtctagaatctcct
cctcctgatccagatgtcgtccgtctggatttaacccatctgaaaatttacacgattgat
gacgaaagtacaaaggaaattgatgacgggttaagtgttgaacagttagagaatggaaca
actcgtctgtggatacatatcgccgatccctctcgtttagtgagtccgggagatgaatta
gatttagaagcgaggaaaagaagtacaagtttatatttacccaccggcatgatttccatg
tttccgccggaattagccaccgggccgatgagtttggtacaaggacaaatctgtccggct
ctaagttttggtgtgattttaaaggaagatggttcagtcgaagattatattattcatgct
agtttagttaaacctacctatcgactgacttatgatgatgtcgatgaaattttgcaactc
gatattaaagctgaaccggaagtaaaaattttagctgatagtgcggctcggcgactagaa
tggcgaaaatctcaaggctcaattaatatttctatgccagaggccgtgattaaagttaaa
gaaaatgatgagattatcattgaattactggaaacttctcgctctcgtcagctagtggca
gaaatgatgattttagcgggggaagtcgccggtcattactgccaacaccatgaactcccc
gttccgtttcggggtcaacctcaacccgaattacccccagaagaggaattaatcgttttg
ccagccggtccggtgcgctcttgtgccctccgtcgctgtatgcctcgttctgaattaggg
acatctccatcccgtcacgccagtttaggattagatgtctatactcaggttacatcgcct
attcgtcgttataccgatttattaacccattttcagcttaaagctcatttacggggcgat
ccgttgcccttttcgggggatcaaatgcaagagatcctctttagcgtggctacttctgcc
tctgaggcgacctctgtcgaacgtcagactaatcgttattgggggttagaattcttgcgg
cgtaatggaaatcaaacctggtacgcgattttgttgcgctggttacgggaagaggaaaat
ttaggcttaattttactcgaagagttaggattagagttacctcatcgctttgagcgccct
ttagctttgggtgaacggtttgcggtgcaagtcactcgttctgatcctcatcgggatgag
attcgctttcgagaaatgttatcccatgaaattcaatccgcaattagttaa
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