Gloeothece citriformis: PCC7424_2770
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Entry
PCC7424_2770 CDS
T00808
Name
(GenBank) protein of unknown function UPF0027
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
cyc
Gloeothece citriformis
Brite
KEGG Orthology (KO) [BR:
cyc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cyc03016
]
PCC7424_2770
Enzymes [BR:
cyc01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
PCC7424_2770
Transfer RNA biogenesis [BR:
cyc03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
PCC7424_2770
Prokaryotic type
tRNA splicing ligases
PCC7424_2770
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-ProteinID:
ACK71181
UniProt:
B7K7Y5
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All DBs
Position
complement(3067237..3068418)
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AA seq
393 aa
AA seq
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MPYQQLKLSAPSPILSWANHELGAKETQMAKNVANLPFVFKHVALMPDVHLGKGALVGSV
IATKDAIIPAAVGVDIGCGMAALAMPFNATQLEGKLKKIRLDLEASIPVGFNENKEVEKA
VTNWQSWKDFKELHSGVQKLHNKAMKQMGSLGGGNHFIEICLDEQEQVWLMLHSGSRNIG
NQLALCHISTAKNLAKLTQTSLPDQDLAYFVAKTPEFEAYWRDLQWAQNYARFNRDVMMA
RVKRVVEKHLAGGKPTKPLLTVNCHHNYAEKEMHFDQEVYVTRKGAVRANASDYGIIPGS
MGAKSYIVKGKGNAQSFCSCSHGAGRLMSRNKAKEQFTLDDLIEQTQGIECRKDHGVIDE
IPGAYKPIDEVIAQQSDLVEVVAVLKQVICIKG
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgccttaccaacaattaaaactctccgccccatctcccatattatcctgggcgaatcat
gaattaggggcaaaagaaacccaaatggccaaaaatgtggctaatttaccctttgttttt
aagcacgttgccctcatgcccgatgttcacctaggcaaaggggcattagtcgggtcagtt
attgccaccaaagacgcaattataccggctgcggtaggagttgatatcggttgcggaatg
gctgccctagctatgccttttaatgctactcaactagaaggaaaacttaaaaaaattcgt
ctagacttagaagcctccattcccgttggctttaacgaaaataaagaggtagaaaaagcc
gtcaccaattggcaaagttggaaagattttaaagaactacattccggagtccaaaagtta
cacaataaagcgatgaaacaaatggggtctttaggaggaggcaaccacttcatagaaatc
tgtcttgatgaacaggaacaagtatggttaatgctgcattcaggttctcgcaatattggc
aatcaattagcattatgtcatatttccaccgctaaaaacttagctaaattaactcaaacc
tccttacccgatcaagatttagcctattttgtcgccaaaaccccagaatttgaggcttac
tggcgagatctgcaatgggcacaaaattatgctcgttttaatcgagacgtgatgatggcg
agagttaagcgggttgtagaaaaacacctagcgggaggaaaacctaccaaacccttatta
accgtcaactgtcatcataattacgctgaaaaagaaatgcactttgaccaagaagtttac
gtcactcgtaaaggggcagtacgggcaaatgcgtctgattatggcattattccgggttca
atgggggctaaatcctatatcgttaaaggaaaaggcaatgcccaaagtttttgtagctgt
agtcatggggcagggcgtttaatgtctcgtaataaagccaaagaacaatttaccctcgat
gatttaattgaacaaacccaagggatagaatgtcgtaaagatcatggggtcattgacgaa
attccgggggcttataaacccattgatgaagtcattgcccaacaatctgaccttgtggag
gttgtcgcagtcctcaagcaagtcatctgtatcaaaggttaa
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