Gloeothece citriformis: PCC7424_2871
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Entry
PCC7424_2871 CDS
T00808
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
cyc
Gloeothece citriformis
Pathway
cyc03410
Base excision repair
cyc03430
Mismatch repair
cyc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cyc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PCC7424_2871
03430 Mismatch repair
PCC7424_2871
03440 Homologous recombination
PCC7424_2871
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cyc03400
]
PCC7424_2871
DNA repair and recombination proteins [BR:
cyc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
PCC7424_2871
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
PCC7424_2871
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
PCC7424_2871
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
Toprim
Motif
Other DBs
NCBI-ProteinID:
ACK71276
UniProt:
B7K8S8
LinkDB
All DBs
Position
complement(3193037..3195001)
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AA seq
654 aa
AA seq
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MKLPNQRWIISSPDPKIVEQLVQTTGLLPLMAQVLVNREINTPELAQVYLEPESQLLPQP
LEEFPDLGVSVELLQDAIASQDKIVICGDYDADGMTSTALLLRALKHLGADVDYAIPSRM
KEGYGINTRIVEDCASSGVGLILTVDNGISAYEPIARAIDLGLSVIITDHHDLPEKLPPA
DAILNPKLLPESSPYRGLAGVGVAYILAVTTAQNLGLLKGLTDQLLELFTLGTIADLAPL
VGVNRRWLKRGLRKLPKSQLAGIQALIQMAGVSEEQKQLQPDDIGFKLGPRINAIGRIGD
PQLVIELLTTDEEGLALERAMQCEQINQKRQQLCKKIEEEAINLIETLPVNWQQDRVLVI
VQPHWHHGVIGIVASRLVERYGAPVFIGTYEEEEPEKIRGSARGIEEFHVFEALEFCDDL
LGKYGGHKAAGGFSLPIQNLEAFKERLSRFAHQCLKPEYLKPLIKIDAQTDFKQLTPYLY
QQIDNLQPWGIGNDFPVFWTANVKLIEQRIVGQKHLKLVLAQEDGTEIKAIAWRWADYFP
LPTCLDIAYKLKENHWNGNTTIELEIIGIRLPQNIRATKKAVFQHQGREYACSFWESLNE
LRIRNAQGKVLAVNRGKRIGLLGTNRDNAQEVDVTQPHYYQLIKAAMAALNMEK
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atgaaattgcctaatcagcgttggattatatcatcccctgatcctaaaattgtagagcaa
ttagtacaaaccaccggacttttaccgctcatggcgcaagtattagtcaaccgagagatt
aatactcccgaattagcacaagtttatcttgaaccggaatcacaacttttgcctcaaccc
ctcgaagaatttcccgacttaggggttagtgtagaattgcttcaagatgcgatcgcttct
caagataaaatcgtcatctgtggagattatgacgcggatggaatgactagcacagcccta
ttattacgcgctttaaagcatttaggggcagatgtggattatgccattccctctcggatg
aaagagggttatgggattaatacccgtattgtagaagactgtgctagctcaggggtagga
ttaattttaaccgttgataatggaatttcggcttatgaaccgattgctagggcgatagat
ttaggattaagtgtaattattaccgatcatcatgatttaccggaaaaattacctccggca
gatgccattctcaatcctaaattactgccagaatcttcaccttatcgaggattagccggg
gtaggagttgcctatattttagcggtgacaacggcgcaaaatttgggattattaaaaggg
ttaacggatcaacttttagagttatttactttaggaacaattgctgatttagccccatta
gttggggttaaccgacggtggttaaaacggggactccgaaaactccctaaatcacaatta
gcagggatacaagctttaattcaaatggccggagtcagtgaagaacaaaaacaattacaa
ccggatgatatagggtttaaattggggccaagaattaatgctattggacgaattggcgat
cctcaattggtgatcgaattactcaccactgatgaggaaggactggctttagaaagggca
atgcaatgtgaacaaattaaccaaaaacgtcaacaattatgtaaaaaaatcgaagaagaa
gcgattaatttaattgaaaccttaccggtcaattggcaacaggatcgagttttggttatt
gttcaacctcactggcatcatggagtgattggaattgtggcctctcggttagtagaacgg
tatggtgcgccggtttttattggcacttatgaggaagaagaaccggaaaaaattaggggt
tcagcgagaggtattgaagaatttcacgtttttgaagcgttagaattttgtgatgattta
ttaggaaaatatggagggcataaagccgccggtggatttagtttaccgatccaaaattta
gaggcttttaaagaacggttaagtcggtttgctcatcaatgtcttaaacctgaatattta
aaacctttaattaaaattgatgcccagactgattttaaacaattaactccttatttatat
cagcagatagataatttacaaccttggggaatcggtaatgattttccggttttttggacg
gctaatgttaaattgattgagcaaagaattgtaggacaaaagcatcttaagttagtttta
gctcaagaagacggaacagaaataaaagcgatcgcttggcgttgggctgactattttcct
ttacccacttgtttagacattgcctacaaattaaaagaaaatcattggaatgggaataca
accattgaattagaaataataggaataagactcccgcaaaatattcgggcgacgaaaaaa
gccgtatttcagcatcaaggtagagagtatgcctgtagtttttgggaatctttaaatgaa
ttgagaattagaaatgctcaaggaaaagtattagccgtgaaccgaggaaaacgaatcgga
ttattaggaactaaccgagataatgcccaagaagtagatgtgactcaacctcattattat
caattaattaaagcagcaatggcagccttaaatatggaaaaataa
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