Gloeothece citriformis: PCC7424_3773
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Entry
PCC7424_3773 CDS
T00808
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
cyc
Gloeothece citriformis
Pathway
cyc03410
Base excision repair
cyc03430
Mismatch repair
cyc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cyc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PCC7424_3773
03430 Mismatch repair
PCC7424_3773
03440 Homologous recombination
PCC7424_3773
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cyc03400
]
PCC7424_3773
DNA repair and recombination proteins [BR:
cyc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
PCC7424_3773
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
PCC7424_3773
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
PCC7424_3773
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
DHHA1
RecJ_OB
DUF2399
Motif
Other DBs
NCBI-ProteinID:
ACK72154
UniProt:
B7KJ70
LinkDB
All DBs
Position
4196471..4198828
Genome browser
AA seq
785 aa
AA seq
DB search
MNNEQSTMNDTRWQIITPSEIPSWFLETVKRYAPHSDGKYAAQLLWHRGIQDPLQLPGFL
DPDVYQPSSPFAFGQEMKWAIQRLQQAREKGEKITIWGDFDADGITATSVLWDGLGEFFP
QYLQLDYYIPNRFTESHGLNCSGIDYLANEGTSLIISCDTGSTNLTEIDYAHQLGIDIII
TDHHTLPEDRPPVIAIINPRYFAESHPLYHLSGVAVAYKLIEALYQSLPDIPQNPVENLL
DLVAIGLIADLVQLSGDCRFLAQKGIQILQQQLKNPSRPGVARLLELCQRNGDRPTDISF
GLGPRINAVSRIHGDAKFCVELLTSRDKKRCEKLALETELANTRRKSLQKDIMAQVQKKL
SQLDLSTTSVIVLEDPQWQSGVLGLVAGQIAQEYSRPTILLTTGNEDDNANSTLKLARGS
ARSVNSIDLYQLVASQSHLLHRFGGHPLAAGLSLAVENISLFREGINQQFRQQHGDLALK
GAGIEADLIVTVAELGKALFWELKLLEPYGMGNPIPKLLLQNCWFENTWHNNPKDLRGKT
IQYIKTTFSLWDDSVNEGFPGVWWGHYKDELPQNTRCDVIVELDFNVYQKQYEVRLIAVR
PSHVYTDFQNNFIPSDILLDWRNNTDINPSETIRILKKCPNTWNEIQQEYRRAIALSEKL
ALAYPSPEPLPPVLIWEKLVGMAKYLSRTGETVTIKQIQNQLNLSRYCLKLGFNVLSEFG
FNCHLDQEMIHINRMSNISPQSNTKFNQFLEAIEEEQFIHQYFSRIPLPTLQTILEQIPI
NFEIF
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atgaacaatgaacaatcaaccatgaacgatacgcgatggcaaattatcaccccttcagaa
attccctcctggtttcttgaaactgtcaaacgttatgcccctcattccgatggaaaatat
gcagcacaattattatggcacagaggcatacaagatcccctgcaactgcccggtttttta
gatccagacgtttatcagcctagcagtcctttcgcttttggacaagaaatgaaatgggca
attcaacgcctccaacaagccagagaaaagggagaaaaaattacaatttggggagacttt
gacgcagatggaatcaccgcaaccagcgttttatgggatggactaggagaattttttcct
caatatctccaactcgattattatattcctaatcgttttaccgagtctcatgggttaaac
tgttcgggaattgattacctcgctaatgaaggaacaagtttaattattagctgtgatacg
gggagtaccaacttaaccgaaatcgattacgcccatcaattaggaattgatatcattatt
accgatcatcatactttacctgaagatcgtccccccgttattgccattattaatcctcgt
tattttgccgaatctcatcctttatatcatctctcaggggtggcagtcgcttataaatta
attgaggcactttatcaaagtttaccggatattcctcaaaaccccgtagaaaatttatta
gatttagtagcgatcggattaattgccgatttagttcaattgtcgggagactgccgtttt
ttagcccaaaaagggattcaaattttacaacaacaactgaaaaacccctctcgtcccggt
gtcgcccgtctattagaattatgtcaaagaaatggcgatcgtccgacggatatttctttt
gggttagggccaagaattaacgccgtgagtcgtattcatggagacgctaaattttgtgtt
gaattactcaccagtcgagataaaaaacgctgtgaaaaattagctttagagacagaatta
gctaatactcgtcggaagtctttacaaaaagatattatggcgcaagtgcaaaaaaaactc
tcacaattagacttatcaaccactagcgttattgtcctagaagatcctcaatggcaaagt
ggcgtattaggattagtcgccggacaaattgcccaagaatatagtcgtccgactatttta
ttaactacaggaaatgaagatgataacgcgaattctactctaaaattagccagaggttca
gcccggagtgtgaacagtattgatttatatcaattagtcgcctctcagtctcatttatta
catcgttttggaggtcatcctttggcggcagggttaagtttagcggttgaaaatatttcc
ctatttcgagaaggaattaatcaacaatttcgccaacaacatggagatttagccttaaag
ggagcagggattgaagctgatttaatcgttaccgttgctgaattaggaaaagctttattt
tgggagttaaaacttcttgaaccctatggtatgggaaatcctattcctaaattactccta
caaaattgctggtttgagaacacttggcataataaccccaaagatttaagaggaaaaact
attcaatatattaaaacaaccttttctctttgggatgattccgttaatgaaggctttccg
ggtgtttggtggggacattataaagatgaattaccccaaaatactcgctgtgatgttatc
gttgaactggattttaatgtttatcaaaagcagtatgaagtccgcttaatagctgttcgt
ccgagtcatgtttatacggattttcagaataattttattccgagtgatattttgcttgac
tggcgaaataacacagatattaacccgtctgaaactatcagaatcctgaaaaaatgtcca
aacacttggaacgagattcaacaggaataccgacgggcgatcgctctatcagaaaaactc
gctcttgcttatccttcccctgaacctttacctcctgtattaatttgggaaaagttagtc
gggatggctaaatatctcagtcggactggtgaaacggttacaattaaacagatacaaaat
caattaaatttaagccgttattgtctaaaattaggttttaatgttttatctgagtttgga
tttaattgtcacctcgatcaagaaatgattcacattaaccgaatgtcaaatatttctccc
cagagtaatacaaaatttaatcaatttttagaagcgatagaagaagaacaatttattcat
cagtatttttcccgaattcctctcccaactcttcaaactatcctcgaacaaataccgatt
aattttgagattttttaa
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