Cyanobacterium sp. DS4: Dongsha4_01080
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Entry
Dongsha4_01080 CDS
T11028
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
cyd Cyanobacterium sp. DS4
Pathway
cyd00470
D-Amino acid metabolism
cyd00550
Peptidoglycan biosynthesis
cyd01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cyd00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Dongsha4_01080 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Dongsha4_01080 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
cyd01011
]
Dongsha4_01080 (murD)
Enzymes [BR:
cyd01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
Dongsha4_01080 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
cyd01011
]
Precursor biosynthesis
Amino acid ligase
Dongsha4_01080 (murD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
MurD-like_N
Mur_ligase_C
AlaDh_PNT_C
NAD_binding_8
Motif
Other DBs
NCBI-ProteinID:
WVL00823
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Position
complement(238872..240245)
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AA seq
457 aa
AA seq
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MGKVYIIGLGKSGIAAAKILKKNDEELTIYDSSNSPSLEAIKNDLAKENIVVKLGENLPL
NNVQSPDLIVVSPGVPWDIPILEEARRKGIKTIGEMELAWQYLSKTPWIGITGTNGKTTT
TALVEAMLKMGGIKTSACGNIGYAACDLALESLDNPLEWVVAEISSYQIESSMDLSPRIG
IWTTFTPDHLARHKTLENYHRIKASLLQRSHLKILNGDDPYLHNFGLDLDWKNVYWTSVR
GKEYLLGDIEKGVYLEDSWIVAFKELIAPVSLFKMVGKHNLQNLLMATAAARLAGVSKKA
IADTISSFTGVPHRLELITNIDGVAYINDSKATNYDAAQVGLDSVASPTILIAGGEAKEG
DDTAWINTIKEKCVSVLLIGEAASFFAERFEASGFGQYEIVETMENAVKRGRELASSLKA
KVVLLSPACASFDQYQNFEQRGENFRQICYDLSQKDN
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaagtttatattattggactgggaaagtcaggtattgccgccgctaaaattcta
aaaaaaaacgatgaagaattaacaatttatgatagttctaattctccatctttagaagca
ataaaaaatgatttagccaaggaaaatatagttgttaaattaggagaaaatttaccttta
aataatgttcaaagtcctgatttaattgtcgttagccccggagtgccttgggatataccc
attttagaggaagcgaggagaaaaggaataaaaaccattggtgaaatggagttagcatgg
caatatttatctaaaactccttggattggtattactgggacaaatggaaaaactaccaca
acagcgttagtagaagcgatgttaaaaatggggggtataaaaacctcagcttgtggaaat
attggctatgccgcttgtgatttagcattagagtctttagataatccccttgaatgggtg
gtagctgaaattagtagttatcaaatagaatcttctatggatttatctcctagaattggt
atttggacaacctttactccagaccatttagccagacataaaactttagaaaactaccat
cgtattaaggcgagtttattacagagatctcacctaaaaattctcaatggggatgatcct
tatctacataattttggtttagatttagattggaaaaatgtttattggacaagtgtaaga
ggaaaagaatatttattgggcgatatagaaaagggtgtttatctggaagattcatggatt
gtggcttttaaggagttaattgcccctgtgtctctgtttaagatggtgggaaaacataat
ttacaaaatttattaatggctactgccgccgctagattagcaggtgttagcaaaaaagcg
atcgcagatactatttcgtcatttacaggagtgcctcaccgcctcgaattaattaccaat
atagatggagtagcttatataaacgatagtaaagctaccaattatgatgcggctcaagta
ggtttagattctgtcgcctcccccacgattttgattgcaggaggagaagcaaaagaagga
gatgataccgcatggataaatactattaaagaaaaatgtgtttctgttttactcattgga
gaagcggcttctttctttgccgagcgatttgaggcttctggcttcggacaatatgaaata
gtagaaacaatggaaaatgcagttaaaagaggaagggaattagcttctagcttaaaagca
aaagttgttttactatctcccgcctgtgctagttttgaccagtatcagaactttgagcaa
agaggtgaaaacttccgtcagatatgctatgatctaagccagaaagacaactaa
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