Cyanobacterium sp. DS4: Dongsha4_01510
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Entry
Dongsha4_01510 CDS
T11028
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
cyd Cyanobacterium sp. DS4
Pathway
cyd03420
Nucleotide excision repair
Brite
DNA repair and recombination proteins [BR:
cyd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Dongsha4_01510 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Dongsha4_01510 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_29
RsgA_GTPase
AAA_21
AAA_16
nSTAND1
AAA_23
nSTAND3
AAA_22
AAA_18
Viral_helicase1
AAA_33
Say1_Mug180
NACHT
DnaJ_CXXCXGXG
ATPase
cobW
MeaB
MMR_HSR1
Septin
Motif
Other DBs
NCBI-ProteinID:
WVL00902
LinkDB
All DBs
Position
complement(323770..326658)
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AA seq
962 aa
AA seq
DB search
MSSTIVIRGARQHNLKNIDLELPRNKLIVFTGVSGSGKSSLAFDTIFAEGQRRYVESLSA
YARQFLGQLDKPDVDSIEGLSPAISIDQKSTSHNPRSTVGTVTEIYDYLRLLYGRAGVPH
CPHCGHSIAPETIDQMCDRILSLPEKTKVHLLAPVVRGKKGNHHQLLSSLRSQGFVRVKI
NGEIRELGDNIELKPQLKHNISVLVDRLVVKANIQERLADSLSTCLKLAEGIAIVEILDK
GKTQYIINNFNIAENDPPQPPLIRGEFSEGDLIREEFPDEIVFSENFACPTHGAVMEELS
PRLFSFNSPYGACSHCHGLGSLRQFSPDLVIPDPNAPVKDAIAPWAEKDNPYYASLLEYV
AKEYKFKLTQSWSSLTEKQQHIILYGDQEILQVQYGYYRGVIPMLEKTYQETNSDLIKQK
LEQYLEYQTCEVCHGKRLKPEALAVKLGQYSIFDLTSVSIAEALQRIDKIQLTPKQAQIG
ELALREIKDRLKFLLDVGLNYLSLDRTAMTLSGGEAQRIRLATQIGSGLTGVLYVLDEPS
IGLHQRDNDRLLATLKKLRDLQNTLIIVEHDEDTIKSADHIVDIGPKAGIHGGDVVCQGN
LKQLLNSKESLTGAYLSGRRKIEIPPSRREGNGKSLILKNCHRNNLKNIDVEIPLGKFVC
VTGVSGSGKSTLINELLYPSLQHHLNRNVPFPKQLDSLEGIEAVDKVIVIDQSPIGRTPR
SNPATYTGVFDVIRELFAQTIEAKARGYKAGRFSFNVKGGRCEACSGQGVNIISMNFLPD
VYVQCDVCKGARYNRETLQVKYKGNSIADVLNMTVEEALKVFENIPRAVNRLQTLVDVGL
TYVKLGQSAPTLSGGEAQRVKLATELSRRATGKTIYLIDEPTTGLSFYDVHHLLNVLQKL
ADKGNSIIVIEHNLDVIKCADWIIDLGLEGGDKGGEIVAIGTPEDIAKSKKSYLAKYLKK
LL
NT seq
2889 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcaacaatagttattcgtggtgcaaggcaacataatcttaaaaatattgattta
gaattaccccgcaataagttaatcgtatttactggagtgtctggcagtggcaaatcatcc
ctagcttttgacaccatttttgcagaaggacaacgcagatatgttgagtcactcagtgcc
tatgcccgtcaatttttaggacaactagataaacccgatgtggatagtattgaaggctta
tcccccgctatttctattgatcaaaaatccacttcccataatccccgctcaacggtaggc
accgttacagaaatttatgactatctacggttactctatggtagggcaggagtacctcat
tgccctcattgtggtcattctatcgcccctgaaaccattgaccaaatgtgcgatcgcatc
ttgagcttacctgagaagacaaaggtacatctattagcccctgttgtcagaggaaagaaa
ggcaatcatcatcaactattatctagtttacgctctcaaggttttgttagggtgaaaatt
aacggagaaattagggaattaggagataatatcgaattaaagccccaattaaagcataat
atcagtgttttggtcgatcgcctcgtcgttaaggctaatattcaagaaagactcgctgat
tctctttctacctgtttgaagttagcggaaggaattgctatagtcgagattttagacaag
ggaaagacccagtatatcattaataatttcaatatagcagaaaatgatcctccccagccc
cccttaataaggggggagttttcagagggtgacttaataagagaggaatttcccgatgag
attgttttttcagaaaactttgcttgtcccactcatggagcggtaatggaggagttgtct
ccccgtcttttttcttttaattctccctatggtgcttgtagtcattgtcacggtttaggc
agtttaaggcagttttctcctgatttagtaataccagatcccaatgctcctgtcaaagat
gccattgcaccctgggcagaaaaagataatccctattatgcgtctctattggaatatgta
gcgaaggaatataagtttaaactgactcaatcttggtcaagtttaactgaaaagcaacag
catataattctctatggtgatcaagaaattttacaggtacaatatggctactatcgggga
gttattcccatgctcgaaaaaacctatcaggaaactaactcagatttaattaaacaaaaa
ttagagcagtatttagagtatcaaacctgtgaagtgtgtcacggtaaaagacttaaacct
gaagcccttgccgttaaattaggacaatattccatctttgatttaaccagtgtttccatc
gccgaagccctacaacgcatcgacaaaattcaacttacccccaaacaagctcaaatcggt
gaattagcccttagagaaatcaaagaccgcttaaaatttcttcttgacgtaggtttgaat
tacctaagtctcgatcgcactgccatgactttatcaggaggagaagcgcaacgcatccgt
ttagccactcaaatcggttcaggtttaacgggagtattatatgttttagatgaacctagt
atcggtttacatcaacgagataatgatcgcctcttagctaccctgaaaaaattacgagat
ctccagaatacccttataattgtagaacatgatgaggataccatcaagagtgctgaccac
attgtcgatattgggccaaaggcaggtattcacggaggggatgttgtctgtcaaggcaat
ttaaaacaactacttaacagtaaagaatccttaacaggggcgtatttatcagggagaaga
aagattgaaattcctcccagtcgtagagaaggtaacggtaaatctctcatattgaaaaac
tgtcatcgcaacaacttaaaaaatatcgatgtagagatacctttagggaaatttgtctgt
gtcacgggggtatctggtagcggaaaatccacccttattaacgagttactctatccctct
ctccaacaccatcttaaccgtaatgtgccttttcccaaacagctagactctctcgaaggt
atcgaagcggtagataaagtcattgtaattgatcaatcccccattgggcgcacacctcga
tcgaatcctgctacctatacaggggtttttgatgtgattagggaattatttgctcaaacc
attgaagccaaagcaaggggatataaagctggaagattctcttttaatgttaagggagga
agatgtgaagcctgtagtgggcaaggggttaatattatctccatgaatttcttacccgat
gtctatgtacaatgtgatgtgtgtaaaggggcaagatataaccgtgaaactctccaagtt
aagtataaaggaaattcgatcgcagatgtgttaaatatgaccgtagaagaagccttaaaa
gtatttgagaatattccccgtgcggtaaatcgtttacaaacccttgtggatgtaggctta
acttatgtcaaattagggcaatctgcacccactttatcagggggggaagcccaacgggta
aaattggcaacggaattatctcgccgcgccacaggtaaaaccatttatttgatcgatgag
ccgactacaggtttatcattttatgatgttcaccacttattaaatgttttgcaaaaatta
gcagataaaggcaattctatcatcgtcattgagcataatttagatgtcattaaatgcgcg
gattggattattgatttaggcttggaaggaggagataaaggaggagaaattgtcgccatt
ggtacaccagaagatattgcaaaatcgaaaaaatcctacctcgcaaaatatcttaaaaaa
ttattgtaa
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