Cyanobacterium sp. DS4: Dongsha4_01835
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Entry
Dongsha4_01835 CDS
T11028
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cyd Cyanobacterium sp. DS4
Pathway
cyd03420
Nucleotide excision repair
cyd03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cyd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Dongsha4_01835 (pcrA)
03430 Mismatch repair
Dongsha4_01835 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cyd03400
]
Dongsha4_01835 (pcrA)
Enzymes [BR:
cyd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Dongsha4_01835 (pcrA)
DNA repair and recombination proteins [BR:
cyd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Dongsha4_01835 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
Dongsha4_01835 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
DEAD
AAA_11
Viral_helicase1
Arm_vescicular
ResIII
Vp24_capsid
PcrA_UvrD_tudor
Motif
Other DBs
NCBI-ProteinID:
WVL00961
LinkDB
All DBs
Position
417048..419375
Genome browser
AA seq
775 aa
AA seq
DB search
MNSRIDFLSHLNLSQRQAVEHFCGPLLVVAGAGSGKTRALTYRIANLISTHKVAPENILA
VTFTNKAAREMKERIELIFAQQIAEEKHGNKLELLGELEQKQIKSKVYRRTIKDLWIGTF
HSLCAKILRYDINKYQDDKGRTWQKNFTILDESDVQSLFKQIVTKNLNLDDKKFEPRKIR
YTISNIKNLGFSPRQYALENSDYRGRVIAEIYEEYQNELAKNNALDFDDLLLIPVRIFQE
NESILGYWHNQFHHILVDEYQDTNQIQYNLIRLLSTNNETDKKYWNWNNRSVFVVGDADQ
SIYSFRMADFTILLNFQEDFGDNLPDQETQTMIKLEENYRSRENILQAANYLIEHNSQRI
DKVLKPTRGEGESIYLYRGDNERDEATFVCRQIAQLVRENADLNWGDFAILYRINSQSRA
FEDELIKKNIPYNIVGGLKFYERKEVKDALAYLRLIVNPADTVSLLRIINTPRRGIGKTT
IDNLLTASVELGVPLWEILNDRTSVNTIAGRAAKRVNEFAQLILDCQEMMKESSAVEVLN
HMLLASGYSQDLQQQNTDEAENRLENLNELANAMSQFQEDNEDSSLEGFLSSASLASDLD
NLNEDNQAVSLMTLHSAKGLEFPIVFLVGFEQGLLPHNRSLRDPLELEEERRLCYVGITR
AKEQLFITHARERYSWGNVDYCTPSQFLDELPPELLSSNIPPRKSSRHNIIEETTPKKKS
PSQSWQEGDHLYHPTFGNGVVTHLLGLGSKNTLVVQFEVGRKIINPSHTKLEKIS
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atgaattctcgtattgatttcctcagtcaccttaatttgtctcaacgtcaggcagtagaa
cacttttgtggtcctttattagtcgttgcaggggctggatcaggaaaaacaagggcttta
acctatcgtattgccaaccttatttcaactcataaagtagcacctgaaaatatattagcg
gtgacttttaccaataaagcggcacgggaaatgaaggaaagaattgagttaatttttgct
caacaaatagctgaagagaagcatggaaataaattagaacttttaggggaattagaacaa
aaacagattaaatcaaaagtttatagaaggacaataaaagatctttggattggtactttt
cacagtttgtgtgccaaaattttacgctacgatataaataaatatcaagatgacaaaggg
cgaacttggcaaaaaaatttcacgattttagatgagtctgacgtgcagagtttatttaag
caaattgtgactaaaaacctaaatttagatgataaaaagtttgaacctagaaaaattcgt
tacactattagtaatattaaaaaccttggtttttctcccagacaatatgcgttagaaaat
tcagactatcgaggcagggtaatagcagaaatttatgaagaatatcaaaatgagttagca
aaaaataacgcccttgattttgatgatttattgttaattccagtgagaatttttcaagaa
aatgagtcgattttaggttattggcataatcaattccatcatatccttgttgacgaatat
caggatactaaccagattcaatacaatttaattaggcttttatctactaataatgagaca
gataaaaaatactggaattggaataatagatcagtttttgtagtaggagatgcggatcaa
tcaatctattcttttcgtatggcagattttactattttacttaattttcaggaagatttt
ggggataatttaccagatcaagaaactcaaactatgatcaaattagaggaaaattatcgc
tcaagggaaaacattttacaagcggctaattatttaattgaacataactcccaaagaatt
gataaagtattaaaacccaccagaggagaaggagaaagtatttatctttatcgaggggat
aatgaaagggatgaagccacttttgtttgtcggcaaattgctcaattggtaagagaaaat
gctgatttaaactggggtgattttgccattttataccgcattaactctcaatctcgtgcc
tttgaagatgagttaattaaaaagaatattccttacaatattgtggggggtttaaaattc
tatgaaaggaaggaagttaaagacgctttggcttatttgcgtttgattgtcaatcctgcg
gataccgttagtttactcagaatcatcaacacaccaagaaggggaatcggtaaaaccact
attgataatctattgacggcttctgtggagttaggtgtaccattgtgggagatattaaac
gatcgcacctctgttaatactatagcaggaagggcggcaaaaagagtgaatgaatttgcc
caactgattctcgattgtcaggaaatgatgaaagaatcttcggcggtagaagtgttgaat
catatgttattagcctctgggtatagtcaagatttgcaacaacaaaacaccgatgaagcg
gaaaacagactagaaaacctcaatgagttagcaaacgccatgtcacaatttcaggaggat
aatgaggatagcagtttagaagggtttttaagtagcgcgtctctcgcctcggatttggat
aacctcaatgaagataatcaggcggtttctttgatgacgttacactcagcgaagggattg
gaatttcccattgtctttctggtaggatttgaacagggattattaccccataaccgtagt
ttacgagatccgttagaattagaggaagaaagacgcttatgttatgttggcataactagg
gcaaaagaacaactatttattacccatgccagagaaagatattcttggggtaatgtggac
tattgtacaccatctcagtttttggatgagttaccccctgagttgctttctagtaatatc
cctcctcgtaaatcctcccgtcataatattatcgaagaaacgaccccgaagaaaaaatct
ccttctcaatcatggcaggaaggcgatcatttgtaccatcctactttcggtaatggggtt
gtgactcatttattaggcttggggagtaaaaatactttagttgtgcagtttgaagtggga
agaaaaattattaatcctagtcatacaaagttggagaaaatttcttaa
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