Cyanobacterium sp. DS4: Dongsha4_02285
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Entry
Dongsha4_02285 CDS
T11028
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
cyd Cyanobacterium sp. DS4
Brite
KEGG Orthology (KO) [BR:
cyd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cyd03009
]
Dongsha4_02285 (rimO)
Enzymes [BR:
cyd01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
Dongsha4_02285 (rimO)
Ribosome biogenesis [BR:
cyd03009
]
Prokaryotic type
ribosomal protein modification factors
Dongsha4_02285 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
Mur_ligase_C
AHD
Motif
Other DBs
NCBI-ProteinID:
WVL01042
LinkDB
All DBs
Position
511993..513312
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AA seq
439 aa
AA seq
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MGNKPTIAVSHLGCEKNRIDSEHMLGLLAKSGYGIDNTEELADYVIVNTCSFIESARRES
VRTLVELAENQKKIIIAGCMAQHFQEELLAELPEAVALVGTGDYQNIVDIIERVEKGERV
KAVSAEPTFIADENIPRYRTTTEGVAYLRVAEGCDYRCSFCIIPHLRGNQRSRTLESIVA
EAQQLADQGVKELILISQITTNYGVDLYGEPKLAELLKALGKVDIPWIRIHYAYPTGLTD
KVIEAIASTDNILPYLDLPLQHSHPEILKSMNRPWQGKVNDEIIERIKLALPESVMRTTF
IVGFPGETEQHFQHLLQFVKRHQFDHVGVFTFSPEEGTKAYELSNQLPEEVKEERRNQLM
EIQQPIAAMKNEAEIGKIVPVLIEQENPMTGELIGRSPRFAPEVDGLVYVKGSANLGEIT
PVRITSADVYDLYGETEIN
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgggcaataagccaaccatcgccgtttctcatttaggctgtgaaaaaaatcgcattgat
tctgagcatatgctcggtttattggcaaaatcaggctacggcatcgataataccgaagaa
ttagccgattatgttattgtaaatacttgtagttttattgagtccgctcgtcgagaatct
gtaagaactttagtagaattagcggaaaaccagaaaaaaattattattgctggttgtatg
gcacagcactttcaggaggaattgttggcagaactaccagaagccgttgctttagttgga
actggtgactatcaaaatattgtcgatattattgaacgggtagaaaaaggtgaaagagtt
aaggcggtttctgctgaacctactttcattgcggatgaaaatatacctcgttatcgcact
accactgaaggggtggcttatttaagagtcgctgagggttgtgattatcgttgctctttt
tgtataatcccccatttgcgtgggaatcaaagatcccgtacgctcgaatctattgtggca
gaagcccaacaattagcagatcaaggagtgaaagaattaatcttaatctctcaaattacc
actaattacggtgttgatttatacggtgaacctaagttagctgagttattaaaagcgtta
ggaaaagttgatattccttggattagaattcattatgcttatccgacaggcttaacagat
aaagttatagaggcgatcgcatctacagataatatactgccctatttagatttaccctta
caacattctcaccccgaaatccttaaaagcatgaatcgtccttggcaagggaaagtaaat
gatgaaattatagaacgcatcaaactagcccttcccgaatcggttatgcgaacaacattt
attgtgggatttcctggagagactgaacaacatttccaacatttgttacaatttgttaaa
agacatcaatttgatcatgtgggtgtgttcactttttctcccgaagaaggcactaaggct
tatgaattaagtaatcagttgccagaggaagtaaaagaagaaagacgcaatcagttaatg
gaaatacaacagcccattgccgccatgaaaaacgaggcagaaataggtaagattgttcca
gtattgattgagcaagaaaaccccatgactggtgaattgattgggagatccccccgtttt
gcccccgaggtagatggattagtctatgttaagggttcagcaaacttaggtgagattacc
cctgttcgcatcacctcagccgatgtctatgatctctatggagaaacagagataaattag
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