Cyanobacterium sp. DS4: Dongsha4_02960
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Entry
Dongsha4_02960 CDS
T11028
Name
(GenBank) type II and III secretion system protein
KO
K02666
type IV pilus assembly protein PilQ
Organism
cyd Cyanobacterium sp. DS4
Brite
KEGG Orthology (KO) [BR:
cyd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
cyd02044
]
Dongsha4_02960
02035 Bacterial motility proteins [BR:
cyd02035
]
Dongsha4_02960
Secretion system [BR:
cyd02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
Dongsha4_02960
Bacterial motility proteins [BR:
cyd02035
]
Pilus system
Pilus assembly proteins
Dongsha4_02960
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Ortholog
Paralog
GFIT
Motif
Pfam:
Secretin
STN
Secretin_N
DUF445
Tic22
TMP_2
Motif
Other DBs
NCBI-ProteinID:
WVL01168
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All DBs
Position
671157..673385
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AA seq
742 aa
AA seq
DB search
MNKFLFNQVKVVSGTTAFILLWQSFAIANPRLNKTLKIKKSPEWIAQLSTQNQDVLIPNP
IVEIDGKPVDSTQPTIPAPQFLPRAVAPPVGDMSVSNVRNAIPTINLGTSALIPRLVLRD
APATEVLALLTRAAGLNIIFTDQSGTEGSGATVSLDLENEPIQDVFNSVLLISGLKANRQ
GNTVFVGNKLPPTVKNTITRSIRLNQYSAIGAASFLNSQGAQGNIVELKEEEKDGRVTQT
FEVKPLESEEKDSEYLVLKGLTVHADPIHDTITLVGEPYLVQTATSFLTQLDVRRRQVAV
NVKVVDIQLDQVDSFGSSFSFGIDNTGVVQDGGVGVINFGTNNQNVDSESWRTSGLGLGI
PGYADNELVDPFNNEIVITEEFSSNLSDSLQDTVERSLANVLDQESASNLTDTLSRNFTD
TINRSLSQFGNTTNFTRDQVETLTRNLQQELINTTGRTLSESQLSALTQDVVRDITNNVG
RTVTRTLQGIPLGSPNSGQISPFGVNYDATQPANPATVRPGRNFNVPQAFLAQIRANVTS
GNAKILTDPTLVVQEGQVGAVKLVENVVTSVNTSIDQLSGVRTTTPVIEPAGLTLSVVVD
KIDDNGFITLQVEPNISAPGTPQIFRSGVGADNVITPLVERTVSSGKIRLRDGQTLILSG
IIQDGERTTISKVPILGDLPIIGSLFRSTVKDKARSEVVVILTPQILDDSEGYSGFGYNY
TPSRETGKYLRERGLNIPTTPY
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atgaataaatttctttttaatcaagttaaagttgttagtggtacaaccgccttcattctt
ctttggcaatcttttgccattgcaaatcctcgtttaaataaaaccttaaaaataaaaaaa
tcccctgaatggattgcccaattatccactcaaaatcaagatgtattaatcccaaatccc
attgttgagattgacggaaaaccagtagattcaacccaaccaactattcctgcacctcag
tttttacccagagcagttgctcctccagttggtgatatgtccgtttctaatgtacgcaat
gccataccaactattaacttaggtacatcggctttaattccccgcttggtgttacgagat
gctcccgccacagaagttttagctttattaactcgtgccgcagggttaaatattatattt
acggatcaaagtggtacagaaggaagtggggcgacagtgtccttagatttagaaaatgaa
ccgatacaagatgtttttaatagtgttttattaatttctgggttaaaagctaatcgtcag
ggtaatactgtttttgttggcaataagctccctcccaccgttaaaaatactattactcga
agtattcgacttaatcaatatagcgcgatcggagctgccagttttttgaacagtcagggt
gctcaaggaaatattgtcgagcttaaggaagaagaaaaagacggcagagttactcaaact
tttgaagtgaagcctttagaaagtgaagaaaaagatagtgagtatttagttttaaaaggt
ttaacagttcatgctgatcccattcacgatacaattaccctcgtgggagaaccctattta
gtacaaactgcaacatcttttcttactcaactagatgtacgtcgtcgtcaagtagcggtc
aacgttaaagttgttgatatacaattagaccaagttgatagtttcggctctagcttctct
tttggaatcgataacacaggtgttgttcaggatggaggagttggtgtcattaactttggc
acaaataatcaaaatgttgattctgaaagttggagaactagtggtctaggtctagggata
cctggctatgccgataatgaacttgtagacccgtttaataacgaaatagtgattacagaa
gagttttctagtaatctttctgatagcttacaagacactgtagaacgttcattggcaaat
gttttggatcaggagagtgcatctaacttaacagatactctttcccgtaattttacggat
actattaatcgtagtctgagtcaatttggtaacaccactaatttcaccagagaccaagta
gaaactttgacaaggaatcttcaacaagaattaattaacacaactggcagaactttgagt
gaatcacaattgagtgcattaactcaggatgttgtaagagatataaccaataatgttggt
cgtacagtaacgagaaccttacaagggattccccttggttctcctaattcaggtcagatt
tctccttttggagttaactatgatgctactcaaccggctaatcctgccaccgtaagacct
ggtagaaactttaatgtacctcaagcatttttggctcaaattcgggcgaatgtgacttcg
ggaaatgccaagattctgacagatccaactctggtggtacaagaagggcaagttggggct
gttaaattagttgaaaacgtagttaccagcgtcaatacttctattgatcagttaagtggt
gtcagaaccacaacacctgttatcgaaccagccgggctaactttatcagtagtagtagat
aaaattgatgataatggctttatcacgttacaagttgaacccaatatcagtgcgcctgga
actcctcaaatatttagaagtggagttggtgcagataacgtgattactcctttagttgaa
agaactgtatcttctggtaagattcgtttacgggatggacagactttaattttatcggga
attattcaagatggcgaaagaacaactatttctaaagttcccattttaggagatttacca
attatcggtagtttattccgttctactgttaaggataaagctcgttcagaggttgtggta
attttgactcctcaaattcttgatgattctgagggttatagtggtttcggctataattac
actccatcccgtgaaactggtaagtatttacgagaaagaggtttaaatattcctacaact
ccctattaa
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