KEGG   Cyanobacterium sp. DS4: Dongsha4_03465
Entry
Dongsha4_03465    CDS       T11028                                 
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
  KO
K03551  holliday junction DNA helicase RuvB [EC:5.6.2.4]
Organism
cyd  Cyanobacterium sp. DS4
Pathway
cyd03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:cyd00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    Dongsha4_03465 (ruvB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cyd03400]
    Dongsha4_03465 (ruvB)
Enzymes [BR:cyd01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Dongsha4_03465 (ruvB)
DNA repair and recombination proteins [BR:cyd03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     Dongsha4_03465 (ruvB)
    RecFOR pathway proteins
     Dongsha4_03465 (ruvB)
SSDB
Motif
Pfam: RuvB_N AAA_lid_4 RuvB_C AAA AAA_5 Mg_chelatase AAA_3 TIP49 nSTAND3 AAA_14 AAA_16 MCM TsaE Rad17 Sigma54_activ_2 AAA_18 AAA_2 AAA_25 AAA_24 AAA_28
Other DBs
NCBI-ProteinID: WVL01259
LinkDB
Position
819614..820699
AA seq 361 aa
MAIKRSSSSDKNNQLPKQRQLKKKTPNTPQNEDKEILLPTEIVEDALESDDKIRPHRFAD
YIGQKDLKEVMSIAIQAAKQRNEPLDHILLYGPPGLGKTTMSLILAGEMGVNCKITAAPA
LERPRDITGLLVSLKQGDILFIDEIHRLNRVTEELLYPAMEDGRLDITIGKGQGAKIRSI
PLAPFTLIGATTKIGSLTSPLRDRFGLIQRLQFYHIDELKEIVLRSAQILNLTIDEQGAI
AIASRSRGTPRIANRLLRRVRDYVQVKGEKVINQTLACEALDLHNVDGLGLDWTDRLILT
TMIEQFNRGPVGLDAIAAATGEDSKTIEEVYEPYLLQIGFLNRTPRGRVVTDKACEHLNI
N
NT seq 1086 nt   +upstreamnt  +downstreamnt
atggctataaaaagatcatcatcttcagataagaataatcaattacccaagcaaagacaa
ttaaagaaaaaaactcctaacacaccacagaatgaagataaagaaattcttttaccgacg
gaaatagttgaagatgccttagaaagtgatgataaaattcgtcctcaccgttttgctgat
tatatcggacaaaaagacttaaaggaagtgatgtccattgccattcaggcggcaaaacaa
agaaatgagcctttggatcatattttactttatggtcctccggggttgggcaaaactacc
atgtctttaattttggcaggggaaatgggggtaaattgcaagattacggcggctccagct
cttgaacgccctagggatattacagggttactggtgagccttaaacagggagatatattg
tttattgatgagatccatcggctaaaccgtgttacagaagagttgctgtatccagcgatg
gaggatggacgtttagatattaccatcgggaaagggcagggagcaaaaattcgcagtatt
ccccttgcaccttttactctgattggggcgacaacaaaaatcggttctttaacttctcct
ttgcgcgatcgcttcggtttaatccaaagattacagttttaccacattgatgagctaaaa
gaaattgttttacgttctgctcaaatccttaatttaacgatagatgaacagggtgcgatc
gcaattgctagtcgttcgagaggcacaccccgtatagctaaccgtttactaagaagagta
agagattatgttcaagtgaaaggagaaaaggtaataaatcaaactctagcttgtgaagcc
ttagatttacataatgtggatggtttgggattagattggactgatagattaattctcact
accatgattgaacagtttaaccgaggtcctgtaggactagatgcgatcgcagccgctacg
ggggaagactccaaaaccatcgaggaagtatatgaaccttatttgttacagataggtttt
cttaatcgaactccgaggggtagggttgtcaccgataaagcctgtgaacatttgaatatt
aactaa

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