Cyanobacterium sp. DS4: Dongsha4_04240
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Entry
Dongsha4_04240 CDS
T11028
Symbol
gcvP
Name
(GenBank) aminomethyl-transferring glycine dehydrogenase
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
cyd Cyanobacterium sp. DS4
Pathway
cyd00260
Glycine, serine and threonine metabolism
cyd00630
Glyoxylate and dicarboxylate metabolism
cyd00670
One carbon pool by folate
cyd00785
Lipoic acid metabolism
cyd01100
Metabolic pathways
cyd01110
Biosynthesis of secondary metabolites
cyd01200
Carbon metabolism
Module
cyd_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
cyd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
Dongsha4_04240 (gcvP)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
Dongsha4_04240 (gcvP)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
Dongsha4_04240 (gcvP)
00670 One carbon pool by folate
Dongsha4_04240 (gcvP)
Enzymes [BR:
cyd01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
Dongsha4_04240 (gcvP)
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Gene cluster
GFIT
Motif
Pfam:
GDC-P
GcvP2_C
Aminotran_5
Beta_elim_lyase
Qua1
Motif
Other DBs
NCBI-ProteinID:
WVL01408
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All DBs
Position
complement(992473..995457)
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AA seq
994 aa
AA seq
DB search
MLDLENIASSFVSENSEQKVNSDVSIPREDQFIHRHIGIDSYEEDSIVKKLGYDSLDSLI
DRAIPQSIRFSKPFNLPSPQTETQALKTLSAIASENQVYRSFIGMGYYNCVTPAVIQRNI
LENPNWYTAYTPYQPEIAQGRLEALLNFQTMVIDLTGLEIANASLLDEGTAAAEAMTMSY
GASKSKSKLFFVDENCHPQTIEVIKTRARYLDIELIIDNPFTYDFKNAVFGCLLQYPATD
GTIYDYQAIIEQIHQEKGLVILAADLLALALLKSPGELNADIAVGNSQRFGVPLGYGGPH
AGYFATKEEYKRQIPGRLVGVSVDAQGKPALRLALQTREQHIRRDKATSNICTAQVLLAV
IASSYAVYHGEKGIKNIATRVHQLTRILANSLEKLGYKLQSEHFFDTIKVKVDDNELIAS
IRELAENQCFNFRYYSDGVGISLDEATTLTEVNQICAIFAQNTVYIRLLENKSPLLDASI
YQGDDNISRLGIRASLQRQSRFLTEAVFNQHTSETELLRYLHRLESKDLSLTTSMIPLGS
CTMKLNATSEMLPITWAEFNNIHPFAPLSQTKGYQALFSQLETWLAEITGFAGVSLQPNA
GSQGEYAGLQVIRRYHDSRGEGDRIICLIPESAHGTNPASAVMCGLKVVAVKCDEEGNID
IADLQAKAEKHKDKLAALMVTYPSTHGVFEEGIKDICSIIHSYGGQVYLDGANMNAQVGL
CKPGDFGADVCHLNLHKTFCIPHGGGGPGVGPIGVASHLVPFLPSTSLTSLNKGGNVEES
IGMISSAPWGSASILPISWMYIAMMGGEGLTHATKIAILSANYMAHRLAPHYPILFTGKD
GLVAHECIIDLRHFRKTADISVEDVAKRLMDYGFHAPTMSWPVAGTMMIEPTESESKAEL
DRFCDAMISIRKEIEAIEKGEMDKNDNLLKNAPHTAEMLLKSEWNHPYTREIAAYPDKWT
KEHKFWTSVARIDNAKGDRNLVCSCVGMDNYSVS
NT seq
2985 nt
NT seq
+upstream
nt +downstream
nt
atgcttgacttagaaaatattgcttcctcttttgtctcggaaaatagtgagcagaaagtc
aatagtgatgttagcatacctagggaagatcaatttattcatcgtcatatcggtatcgat
agttatgaagaagattcgatcgtgaaaaaactgggttatgatagtcttgactctctcatt
gatagggcgataccccaatctatccgtttctctaaaccctttaatttaccctctcctcaa
accgaaactcaggcattaaaaacattaagtgcgatcgcatctgagaatcaggtatatcgt
tcttttatcggtatgggttattataattgtgtcacccctgcggtgattcaacgcaacatt
ttagaaaaccccaattggtacacggcttatactccctatcagcctgaaattgcccaagga
agattagaagccttgttaaactttcagacgatggtaatagatttgacggggttggaaatt
gctaacgcctccctcctagacgaaggcactgccgccgccgaagccatgaccatgagttat
ggagcaagtaaaagtaaatcaaagttgttttttgttgacgaaaactgtcatcctcaaacc
attgaagtaattaaaacaagggcgagatatttagatattgagttaattattgataatccc
tttacttatgactttaaaaatgccgtttttggttgcttacttcaatatcctgccactgac
ggcactatttatgactatcaagccattattgagcaaattcatcaagaaaaaggcttagtg
attttagccgccgatttattagcattggcacttttaaaatcccccggagaattaaatgct
gatattgcagtgggaaatagtcaacgttttggtgtaccattaggttatggtgggcctcat
gctggttattttgccacgaaagaagaatataagcgacagataccagggcgtttagtggga
gtttcggtagatgcccaaggtaaacctgctttaaggttagcattacaaaccagagagcaa
cacattcgcagagataaggctaccagtaatatttgtactgcacaggttttattggcggta
attgcttctagttatgcggtttatcacggggaaaaagggatcaaaaatattgccaccaga
gtacatcaattaacccgtattttagccaatagtttagaaaaattaggttataagttacaa
tctgagcatttcttcgatactatcaaggttaaagttgatgataatgagttaatcgcctct
attcgagaattagcagaaaatcagtgctttaatttccgttattacagtgatggtgttggt
attagtctggatgaggcaaccactctcacagaagttaatcagatttgtgcaatttttgct
caaaatactgtgtatattcgcttattggaaaataaatctcctttattggatgcttctatt
tatcagggagatgataatattagccgtttagggattcgagcttctttacagcgtcaaagt
cgttttctcacagaagcagttttcaatcagcacactagcgaaacggaattattacgctat
ctacatcgtttagaaagcaaggatttatccttaacaacttccatgattcctctcggctct
tgtaccatgaagttgaatgcaacttcggaaatgttacctattacttgggctgaatttaat
aatattcatccttttgcaccattgtctcaaacaaagggttatcaggctcttttttctcag
ttagaaacatggttagcagaaatcactggttttgcaggagtctctttacaacccaatgct
ggttcacagggagaatatgcagggttacaagttattcgccgttatcatgacagtcgagga
gagggagatcgcattatttgtcttattccagaatctgctcacggtacaaatcctgctagt
gcggtgatgtgtggtttaaaagtggttgcggttaaatgtgatgaggaaggtaacattgac
attgctgatttacaggcaaaggccgagaaacataaagataaattagcggcgttaatggtg
acatatccttctactcatggggtatttgaggaagggattaaagatatatgcagtatcatc
cacagttatggtgggcaagtatatctcgatggtgcgaatatgaatgcccaagttggctta
tgtaaaccgggagattttggggccgatgtctgtcacctcaatttacataaaaccttttgt
atccctcatggtgggggaggccctggggttggccccattggtgtcgcctctcatttagta
ccttttttaccttctacttctttaacctcccttaataaggggggaaatgtggaggagtct
attggtatgatttcctctgccccttggggaagtgctagtattttgcccatttcttggatg
tatattgccatgatgggaggagaaggattaacccatgccacgaagatagccattctcagt
gctaattatatggcacatcgtctcgcccctcactatccaattctatttactggtaaagat
ggtttagtcgcccatgagtgtatcatcgatttacgtcattttcgtaaaactgcggatata
agcgtggaggatgtagcaaaacggttaatggattatggttttcatgctccgactatgtct
tggcccgttgctggtacaatgatgatcgaacctacagaaagtgaatcaaaagccgaatta
gatcgtttttgtgatgctatgattagcattcgtaaggaaattgaagccattgaaaaaggg
gaaatggataaaaacgataatctcttgaaaaatgctccccatactgccgaaatgttgctt
aaatcggagtggaatcacccttacaccagagaaatagcggcttatcctgataaatggact
aaagagcataaattctggacttctgtggctcgtattgataatgctaagggcgatcgcaat
ttggtatgttcttgtgtaggtatggacaactatagcgtgtcttag
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