Cyanobacterium sp. DS4: Dongsha4_05545
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Entry
Dongsha4_05545 CDS
T11028
Name
(GenBank) GntR family transcriptional regulator
KO
K07978
GntR family transcriptional regulator
Organism
cyd Cyanobacterium sp. DS4
Brite
KEGG Orthology (KO) [BR:
cyd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cyd03000
]
Dongsha4_05545
Transcription factors [BR:
cyd03000
]
Prokaryotic type
Helix-turn-helix
GntR family
Dongsha4_05545
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GntR
HTH_36
HTH_Crp_2
Rrf2
LexA_DNA_bind
TrmB
MarR
HTH_24
MarR_2
DUF2250
HTH_27
Fe_dep_repress
HTH_11
Motif
Other DBs
NCBI-ProteinID:
WVL01652
LinkDB
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Position
complement(1313360..1314343)
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AA seq
327 aa
AA seq
DB search
MFNFRIQADSHISPSQQLIDQIQFAIASGQYPPGHRLPSTRQLAQVTNLHRNTISKVYRQ
LEKKGLVESITGSGIYVKSQGDEATKKNKHLVGLDSSQADIIKRSIEQLLQQGNNLEQIK
QLFLGEIEWRLRCSALILVTVPKVDIGAGQLMVLELEQALFVPTQLVPLEELNHILTQTK
SATVVTSRYFVPQVLEIVSPESTRVIPIDIYDYKKELTIIRQLPKNANLGIVSLSGGILR
VAEILIHSLRGDEINTITATIHDQRKLNHLIRFADIIMCDRNCSTLVKKTLQKLESDLIR
IPKIIATNNYISEKSIQLLKKELEINH
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgttcaattttcgcatccaagctgatagtcatatttccccttctcaacagttaattgat
caaattcagtttgcgatcgcatctggtcaatatccccccggtcatcgtttacctagtaca
agacaactagcccaagtcaccaatttacatcgcaacaccatcagtaaggtttatcgacaa
ctggaaaaaaaaggtttggtagaatccatcacaggttcaggcatttatgttaaatctcaa
ggagatgaagccacaaaaaaaaataaacatttagtcggattagattcatctcaggcagac
attattaagagaagtattgaacaattattacaacaaggtaataacctagaacaaattaaa
caacttttcttaggggaaattgaatggcgtttaagatgtagtgccttaatcttagtaaca
gttccaaaagtggacataggtgcaggacagttaatggtactagaattagaacaggcttta
tttgttcccactcaattagtgcctttagaagaattaaatcacatcctaactcaaaccaaa
tctgccacagtggtaacaagtcgttattttgtgcctcaagttttagaaattgtctctcct
gaatccacaagagttattcccatcgatatttatgactataaaaaagaattaaccatcatt
cgacaattacccaaaaatgcgaatttaggaatcgttagcttaagtggtggtattttaaga
gttgcagaaattttaattcatagtcttaggggagatgaaattaatacgattactgctact
attcatgatcaacggaaacttaatcatcttattcgttttgctgatataataatgtgcgat
cgcaactgctccacccttgtcaaaaaaaccctgcaaaaactagaatcagacttgatcaga
ataccaaaaattattgccaccaataactacatcagcgaaaaatctattcaactcctaaaa
aaagaattagaaattaaccattaa
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