Cyanobacterium sp. DS4: Dongsha4_06020
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Entry
Dongsha4_06020 CDS
T11028
Symbol
thiC
Name
(GenBank) phosphomethylpyrimidine synthase
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
cyd Cyanobacterium sp. DS4
Pathway
cyd00730
Thiamine metabolism
cyd01100
Metabolic pathways
cyd01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
cyd00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
Dongsha4_06020 (thiC)
Enzymes [BR:
cyd01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
Dongsha4_06020 (thiC)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
DUF2322
Motif
Other DBs
NCBI-ProteinID:
WVL01744
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Position
1431568..1432950
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AA seq
460 aa
AA seq
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MRTEWIAKRRGQANVSQMHYARQGVITEEMHYVATRENLPADLIRDEVARGRMIIPANIN
HPNLEPMCIGIASQCKVNANIGASPNSSNIDEEVAKLNLAVKYGADTVMDLSTGGGNLDE
IRTAIINASPVPIGTVPIYQALESVHGKIENLTADDFLHIIEKHAQQGVDYMTIHAGILI
EYLPLVRNRITGIVSRGGGIIARWMLHHHKQNPLYTHFDDIIEIFKKYDVSFSLGDSLRP
GCTHDASDEAQLSELKTLGQLTRRAWEHDVQVMVEGPGHVPMDQIEFNVKKQMEECSEAP
FYVLGPLVTDIAPGYDHITSAIGAAMAGWYGTAMLCYVTPKEHLGLPNAEDVRNGLIAYK
IAAHAADIARHRPGARDRDDELSKARYNFDWNRQFELSLDPDRAREYHDETLPADIYKEA
EFCSMCGPKFCPMQTKVDADALTELEKFLAKEASSKQPVA
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgcgtacagaatggatagcgaaacgtcgtggacaagctaacgtgtctcaaatgcactat
gctcgtcaaggtgttattaccgaagaaatgcactatgtagcgacaagagaaaacttacct
gctgatttgattcgagatgaagtggcaaggggcagaatgattattcctgctaatattaat
caccccaatcttgagcctatgtgcatcggtattgcctctcaatgtaaagtgaatgcgaat
attggggcttctcctaattcatccaatattgatgaagaggtagctaaattaaacttagcg
gtaaaatatggtgcagataccgttatggatttatccaccggtggcggtaatttagatgaa
attcgcacagcaattattaatgcttctcctgtccccattggtacagttcccatttaccaa
gccctagaaagtgtacacggaaaaatcgaaaatcttaccgccgatgactttttacacatc
atcgaaaaacacgctcaacaaggtgttgattatatgactattcatgcaggtattttaatt
gaatacttgcctttagtacgtaatcgtatcactggtattgtatcccgtggtggtggtatt
attgcccgttggatgttgcatcatcataaacaaaatcccctttacactcattttgatgat
attatcgaaatctttaagaaatatgatgtttctttcagtttgggtgattctttgcgcccc
ggttgtacccatgatgcttctgatgaggctcaattatctgagttaaaaactttaggacaa
ttaacccgccgtgcgtgggaacatgatgtacaagtaatggtagaaggccctggccatgta
ccgatggatcaaattgagttcaatgtgaaaaaacaaatggaagaatgctcagaagctcct
ttctatgttttaggtcctttggtgacagatattgcccccggttatgatcatatcacaagt
gcgatcggagcggctatggctggttggtatggtactgcgatgctatgctatgttactccg
aaagaacatttgggcttacctaacgccgaagatgtgcgtaatggcttaattgcttataaa
attgcggctcatgcggcagatattgcccgtcatcgccccggtgcaagagatagagatgat
gaactttctaaagctcgttataactttgactggaatcgtcagtttgagctatctttagat
ccagacagagcaagagaataccatgatgagacattacctgcagatatttataaagaagca
gaattttgttctatgtgtggtcctaaattctgtcctatgcaaactaaagtagatgcggat
gctttaacagagttggaaaaattcttagcaaaagaagctagtagtaagcaacctgtggca
tag
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