Cyanobacterium sp. DS4: Dongsha4_07595
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Entry
Dongsha4_07595 CDS
T11028
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
cyd Cyanobacterium sp. DS4
Pathway
cyd00220
Arginine biosynthesis
cyd00240
Pyrimidine metabolism
cyd00250
Alanine, aspartate and glutamate metabolism
cyd01100
Metabolic pathways
cyd01110
Biosynthesis of secondary metabolites
cyd01240
Biosynthesis of cofactors
Module
cyd_M00978
Ornithine-ammonia cycle
Brite
KEGG Orthology (KO) [BR:
cyd00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
Dongsha4_07595 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
Dongsha4_07595 (carB)
00220 Arginine biosynthesis
Dongsha4_07595 (carB)
Enzymes [BR:
cyd01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
Dongsha4_07595 (carB)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D1
CPSase_L_D3
MGS
ATP-grasp
Dala_Dala_lig_C
ATP-grasp_3
ATPgrasp_Ter
ATP-grasp_4
ATP-grasp_2
ATP-grasp_5
GARS_A
Epimerase
CoA_binding_2
Motif
Other DBs
NCBI-ProteinID:
WVL02041
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All DBs
Position
1754920..1758168
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AA seq
1082 aa
AA seq
DB search
MPRREDINKILLLGSGPIIIGQACEFDYSGTQACKALREEGYEVVLVNSNPATIMTDPET
AERTYIEPITPEIVEKVIAKERPDALLPTMGGQTALNTAVALAESGVLNKYGVELIGAKL
PAIKMAEDRELFKEAMARIGVPVCPSGIASNWEEAKAVAEEIGSYPLIIRPAFTMGGTGG
GIAYNQEEYEEMAKFGIDASPVSQILVEKSLIGWKEYELEVMRDLADNVVIICSIENIDP
MGVHTGDSITVAPAQTLTDKEYQRLRDYAKAIIREIGVETGGSNIQFSVNPVNGEVIVIE
MNPRVSRSSALASKATGFPIAKFAAKLAVGYTLDEISNDITQKTPASFEPTIDYVVTKIP
RFAFEKFPGAEPILTTQMKSVGEAMAIGRTFCESFQKALRSLETGRYGFGCDKNETLPTL
SQISSHLRTPNPERIFSVYHAFKLGMSVEQVFELTAIDPWFLDKMQSLVEIEKFMKRTSL
KDIKADDMLTIKQHGFSDRQVAFATKTTEDEVRAYRKSLGITPVYKLVDTCAAEFEAFTP
YYYSTYESGESENNITDKPKVMILGGGPNRIGQGIEFDYCCCHAAFALSDAGYETIMVNS
NPETVSTDYDTSDRLYFEPLTKEDVLNIIEAENPDGVIIQFGGQTPLKLAVPLKNYLAHP
DTTVKTKIWGTSPDSIDTAEDREKFEAILKELDIKQPPNGIARSFEEALAVANRISYPVV
VRPSYVLGGRAMRIVYNEQELEHYMTYAVDVEPDHPILIDKFLENAIEVDVDAIADHTGQ
VVIGGIMEHIEEAGVHSGDSACSIPYTSLSDDVLSIIRTATVKLAKSLQVIGLMNIQYAV
QGETVYILEANPRASRTVPYVSKATGRPLAKVASLIMSGKTLAELDVTEEIIPRHVAVKE
AVLPFSKFPGTDTLLGPEMRSTGEVMGIDSDFGKAFAKAEIGAGVILDTTGTVFISMNNR
DKGAIVSVAKDLQALGFKIVATSGTRQTLLENGVKDVDLVLKLHEGRPHVVDLIKNKQIQ
FIINTPSNEEETQTDGRKIRRAALDYKLPIITTIAGARATVEAIRSLQSEPLQVKALQDY
FV
NT seq
3249 nt
NT seq
+upstream
nt +downstream
nt
atgccacgtcgtgaagatataaataaaatattactattaggttcaggacctattattatt
ggacaagcctgtgaatttgactattctggtacacaagcctgtaaagcgctacgagaggaa
ggttatgaagtagttttagttaactccaaccctgctactattatgactgatcccgaaacg
gcagaacgtacctatatagaacccattacccccgaaatagtcgagaaagtcatcgccaaa
gaaagacctgacgcattattacccacaatgggaggacaaactgccctcaatactgctgtt
gctttagcagaatcaggagtattgaataaatacggagtagagttaattggggcgaaatta
cctgctatcaaaatggcagaagatagggaattattcaaagaagcgatggctcgtatcggt
gtgcctgtatgcccttcagggattgctagtaactgggaagaagctaaagccgtagcggaa
gaaattggttcttatcctttaattatacgtcctgcattcactatgggcggtactggtggc
ggtattgcctataaccaagaagaatatgaggaaatggcaaagtttgggattgatgcttct
cccgtgtcgcagattttggtagaaaaatctctcatcggttggaaggaatacgagttggaa
gtaatgcgcgatttagcggataatgtggttattatctgttcgatcgaaaatattgatccg
atgggggtacatactggagattctatcaccgttgcccctgctcaaactttaactgataaa
gaatatcaaagattaagagactacgctaaagctattatccgagagattggggtagaaaca
ggaggttctaatattcagttttccgttaatcctgttaatggggaagtgattgtaattgag
atgaatccccgtgtatctcgttcctcagcattggcatcaaaagcgacaggtttccccatt
gctaaatttgcggcaaaattagcggtaggttatacccttgatgagatttccaatgatatt
acccagaaaactcctgcttcttttgagcctaccattgattatgtagtgaccaaaattcct
cgttttgcctttgaaaaattccccggtgctgaacccattttaactacacaaatgaagtct
gtgggagaggcaatggctatcgggcgtactttctgtgaatctttccaaaaagcgttaaga
tctttagaaacagggcgttatggctttggttgtgataaaaacgagactttacccactctc
tctcaaattagctcccatttacgcacccctaaccctgaaaggatttttagtgtttaccat
gcctttaaattggggatgagtgtagaacaagtgttcgagttaactgcgatcgacccttgg
tttttggataaaatgcagtcattagtggagatagagaagtttatgaagcggacttcttta
aaagacattaaagctgatgatatgcttaccattaaacaacatggattcagcgatcgccaa
gttgcttttgcgaccaagacaacagaagatgaagtaagagcatatcgtaaatcgttaggt
atcacccctgtttataaattagtggatacttgtgccgccgagtttgaagcctttaccccg
tactattactctacctatgaatcaggggaaagtgaaaacaatatcaccgataaaccgaaa
gtaatgattttaggcggaggccctaatcgtatcggacagggtatagaatttgattattgt
tgttgtcatgcggcttttgctttatcagatgcaggttatgaaacaattatggttaactcc
aatcctgaaactgtttccactgattatgatacaagcgatcgcctttattttgagccttta
actaaagaagatgtcttaaatatcatcgaagcggagaatcctgatggtgtaattattcaa
tttgggggacaaactcccttaaaattagctgtacctttgaaaaactacctcgcacatcct
gatactaccgttaaaaccaaaatttggggaacttctcccgattccatcgacaccgccgaa
gatagagagaaattcgaggcaatcctgaaggagttagacatcaaacaacctcccaacggt
atcgcgcgcagttttgaagaggctttagccgttgctaatcgcatcagttatcctgtggtt
gtgcgtccttcctatgtactcggaggcagagctatgcgtatcgtttataatgagcaggaa
ttagaacattatatgacctatgcggtagatgttgagcctgaccatcctattttaatcgat
aaattcctcgaaaatgccattgaggttgacgtagatgcgatcgcagatcatactggacag
gtggtcattggtggtatcatggagcatatcgaggaagcaggggtgcattctggggattcc
gcttgttcgattccttatacttccctctccgatgatgttttaagcatcattcgcactgca
accgtcaaattagctaaatccttgcaagtaatcggcttaatgaacatccaatatgccgta
caaggagaaaccgtctatatcctcgaagcgaatcctcgtgcgtctcgtactgtgccgtat
gtttctaaagcgacaggcagacctttagccaaagttgcttccctcatcatgtctggtaaa
acccttgcagaattggacgtaaccgaagagataatccctcgtcatgtggcagttaaagag
gctgtattgcccttcagcaagttccccggtacggataccttattaggtcctgaaatgcgt
agtacaggcgaggtaatgggcattgatagcgattttggtaaagccttcgctaaagcggaa
atcggtgcaggtgtaattcttgataccactggaacggtctttatttccatgaataatcga
gacaaaggtgcgatcgtatctgtggcaaaagacttacaagctctaggtttcaagattgtg
gcgacttccgggactcgtcaaaccctgttagaaaatggggtgaaggatgtggatttagtc
ttaaaactccatgaaggtcgtccccatgtagtggacttgattaaaaataagcaaattcag
tttattatcaatactcctagcaatgaggaggaaacccaaaccgatgggcgtaaaattcgt
cgggcggctttagattacaagttaccgattattacaactattgcaggagcaagggcaaca
gtggaagcgattcgatcgcttcagtcagaacctttacaggttaaggctttacaggattat
tttgtgtaa
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